Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00884 ATGGCTTCCCTTCTTCATATTCAAGCTGATGCTACTTACAGTGAACCCAGCAATAGCTCTACAAAGGTGGAAACCAACATAGACTTTGTTACCCCATTTGAGTATGAAGCTACCAAATTCACACACAGCAGTGAAAGTAGTCAGAGAGAGGAGCAGGGCATAAAAGTGACATGGGAGGATTTGCGGGTGACAGTCCCAAATGGAAAGAGTAGGAAACCAATACTACAGGTCCTTACTGGTTATGCCAAGCCAGGAGAGCTCTTGGCTATAATGGGTCCTTCTGGTTGTGGCAAAAGCACCCTTCTTGATGCTTTGGCAGGAAGATTAGCTACAAACACAAAGCAAACAGgaaaaattcttatcaatgGCCAAAAGCAAGCATTGGCTTATGGAACATCAGCTTATGTAACACAAGATGATGCTATGCTGCATACCTTGACAACTGGAGAAGCTGTATATTACTCAGCTCAGCTTCAGTTTCCAGATTCCATGTCAAAGgcagagaaaaaggaaagagcaGAAATAACAATCAAGGAAATGGGTCTGCAAGATGCCATTAACACAAGGATTGGAGGGTGGGCTTCTAAAGGCCTCAGTGGAGGGCAAAAGAGAAGACTTGGCATCTGCATAGAGATTCTGACCCGCCCAAGGCTTCTCTTCCTTGATGAACCTACTAGTGGGCTTGACAGTGCAGCATCCTATTATGTTATGAGCAGAATTGCAAGTCTAAATCTGAGGGATGGCATTAAAAGGACTATTGTTGCATCGATCCATCAGCCTAGTAGTGaagtttttcaacttttccaTAACCTGTGCCTTCTATCTTCTGGTGAAACAGTGTACTTTGGCCCTGCTTCTGATGCAAATGAGTTTTTTGCTTCAAACGGTTTTCCTTGCCCAACTCTCTACAATCCTTCTGATCATTTCTTGAGGATCATAAACAAGGATTTTGAAGAGGATGCTGAAGGAGGACTTGGTAAAGGAGTAAGCACAGAAGAAGCAATAACTATCCTTGTAAAGTCTTATAGATCTTCAGCAATTAATGAAAAAGTCCAAAAAGAAGTGGCTGATATATGTGGAAGTGATTCTTGTGAGattgagaagagaagaagtcATGCTGGATTCCTTGCTCAGTGCCTTGTTCTTATAAGAAGATCTTCACTGCACATGTATCGCGATATAAGTAATTACTGGTTGCGTCTAGTTGTCTATGTTGCCATAGCTATAAGTCTTGGAACTATATTCTATGACGTTGGCTCAAGCAGTGAATCCATTCAGGCTAGAGGGTCGATGCtcacattttttgtttcagtCCTAACTTTTATAACCCTTATTGGTGGATTCCCTCCTTTTATTGAGGAAATGAAGGTATTTGAACGAGAGAGATTAAATGGGCATTACAGTGTCACTGCATTTCTGATAGGCAACACATTCTCAGCAGCTCCATACATGTTGCTAATCTCTTTGATTCCTGGAGGAATAGCCTATTATCTTTCTGGTCTGCAGAAAGGATCTGAGCATTTTCTGTACTTCACCTGTGTTCTTTTTGCCACTGTGATGTCAGTTGAGAGCCTCATGATGCTTGTGGGCAGTGTGTTCCCCAATTTCATAATGGGCATGATCATTGTTGGAGGAATCCAAGGGATCATGATCTTACTTGGTGGATTCTATCGTTTGCCAGAAGATCTTCCCAAACCAATCTGGAGATATCCTTTATCCTATGTTTCCTTCCACAAGTATGCATTCCAAGGATTGTTCAAGAATGAGTTTGATGGATTAACATTTTCTAGAGAACAAGTGAAAATTAGTGGTAAGGAAATTCTCAAGCAGACATGGCAAGTGGAAATGGGTCATTCCAAGTGGGTAGATCTTCTTGTTTTGCTGGGAATGACTGTGTTCTTTAGGGTTATGTTCTTGGGTGTTATTAAGATCAAGGAGAGGATGAAGCCTATTCTTTCAGCTCTTAAttctccaaaagaaaatatcagttTCTCTCAAAACTA 2003 0.3939 MASLLHIQADATYSEPSNSSTKVETNIDFVTPFEYEATKFTHSSESSQREEQGIKVTWEDLRVTVPNGKSRKPILQVLTGYAKPGELLAIMGPSGCGKSTLLDALAGRLATNTKQTGKILINGQKQALAYGTSAYVTQDDAMLHTLTTGEAVYYSAQLQFPDSMSKAEKKERAEITIKEMGLQDAINTRIGGWASKGLSGGQKRRLGICIEILTRPRLLFLDEPTSGLDSAASYYVMSRIASLNLRDGIKRTIVASIHQPSSEVFQLFHNLCLLSSGETVYFGPASDANEFFASNGFPCPTLYNPSDHFLRIINKDFEEDAEGGLGKGVSTEEAITILVKSYRSSAINEKVQKEVADICGSDSCEIEKRRSHAGFLAQCLVLIRRSSLHMYRDISNYWLRLVVYVAIAISLGTIFYDVGSSSESIQARGSMLTFFVSVLTFITLIGGFPPFIEEMKVFERERLNGHYSVTAFLIGNTFSAAPYMLLISLIPGGIAYYLSGLQKGSEHFLYFTCVLFATVMSVESLMMLVGSVFPNFIMGMIIVGGIQGIMILLGGFYRLPEDLPKPIWRYPLSYVSFHKYAFQGLFKNEFDGLTFSREQVKISGKEILKQTWQVEMGHSKWVDLLVLLGMTVFFRVMFLGVIKIKERMKPILSALNSPKENISFSQN 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00884 667 Pfam ABC transporter 79 226 IPR003439 GO:0005524
Bva13g00884 667 SMART AAA_5 84 273 IPR003593 -
Bva13g00884 667 Gene3D - 41 296 IPR027417 -
Bva13g00884 667 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 11 650 - -
Bva13g00884 667 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 11 650 - -
Bva13g00884 667 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 56 301 IPR003439 GO:0005524
Bva13g00884 667 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 292 IPR027417 -
Bva13g00884 667 Pfam ABC-2 type transporter 378 590 IPR013525 GO:0016020|GO:0140359
Bva13g00884 667 ProSitePatterns ABC transporters family signature. 198 212 IPR017871 GO:0005524
Bva13g00884 667 Pfam ABC-2 type transporter 258 314 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00884 Bva-Chr13 4130481 4133806 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00884 72 236 Calmodulin-binding Proteins AT2G36910 29.213 3.50e-09 58.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00884 13 4130481 4133806 Bva13g00884 13 4130481 4133806 ECH