Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00883 ATGACCTCCTTGCTACATCCTCATGCTCAATCTGATGCTAGTGACTATAAACCAAACAATTGCTCTAGAATTCTGCAGAGTAACTCAGAATCTGAGGCTACATTTGAGATGGAAGCTATGAAGCCATCAACAACAGAAAACATCAAAGTTATTGAGGTGGGGGAGGAAGGTGTTTTCTTAACGTGGGAGGATCTTTGGGTTACTGTTTCAAATGGAAAGAATGGCAGGAAAGCAATTCTCGAGGACTTAACGGGTCATGCCAAGCCAGGACAGCTACTTGCTATAATGGGTCCTTCTGGCTGTGGCAAGTCCACTTTACTTGATGCTTTAGCagGAAGATTGGCTTCAAACACAAGGCAAACTGGGAAGATTCTGATCAATGGCCGCAGACAAGCTTTGGCTTATGGAACATCAGCATATGTAACAGAAGATGATGCCATATTGAATACATTAACAGTTGGAGAAGCTGTTTACTACTCAGCTCAGCTCCAATTGCCAGACTCCATGTCCGAATcagagaagaaggaaagagcAGACTTCACAATCAGAGAAATGGGTCTGCAAGATGCCATTGATACAAGAATTGGAGGGTGGGGATCCAAAGGTGTCAGTGGGGGACAAAAGAGAAGAGTCAGCATTTGCATTGAGATCTTAACACACCCAAGGCTTCTTTTCCTTGATGAACCCACAAGTGGGCTTGACAGTGCAGCTTCTTATTATGTCATGAGCAGAATTGCAAGCCTGAATCAAAAGGATGGCATTAAAAGGACTATCATTGCATCAATCCATCAGCCAAGCTACgaaatttttcaacttttccaCAACCTTTGCCTTCTGTCTTCTGGTAAAACAGTGTACTTTGGTCCTGTCTCTGCTGCAAATAAGTTTTTCTCGTCAAATGGCTTTCCCTGCCCAACTCTTCAGGCTCCTTCTGATCATTTTGTAAAAACCATAAATAGGGATTTTGATCAGGACCCAGAGAAAGGATTATCTGGTGGATCAACCACAGAAGAAGCCATTAATATCCTTGTGCAATCATACAAGTCATCTGACATTTTCCACCGAGTTCAAAAGGAAGtagttgaaataagaaaaatgGACTCTGATGcaatggagaagaaaaatcatgCTGCCTTTTTTACTCAGTGTCTCATACTTATTAAGAGATCTTTTGTGCATATGTATCGTGAAGTAGGCTATTACAGGCTACGCATGCTTATCTATGGTGCCTTGGCTTTGAGTTTAGGGACCATTTTCTATGATATTGGCTCAGGCAGTGAATCAGTTCAGACTAGAGCTTCCCTGCTCGTGTTTGTCGTTACATTCCTCACTTTCATAACCGTTAGTGGATTCCCAGCTTTTGTGGAGGAAATGAAGgtttttgaaagagaaagactAAACGGACATTATGGGGTGACAGCATTCATCATTGGCAACACATTCTCTGCCATTCCATTCCTGCTCTTGATGTCAATCATCCCAGGAGCAGTGGTCTATTACCTTGTGGGACTTCACCAAGGCCATGAACACTTGCTGTACTTCATCTCTGTGCtctttgtttctgttttgctGGTTGAGAGCCTTGCCATGATTGTTGCCAGTGTTGTTCCCACTTTCCTCATGGGAATAATCTACTGTTCTGGCATCTTGGGAGTTATGATGTTAGACAGTGGATTCTACAGATTGCCAAAAGACATTCCCAAGCCATTTTGGAGATACCCTTTGCACTACATTTCCTTCCACAAATATGCATACCAAGGTTTGTTCAAGAATGAGTTTCAAGGCTTATCATTTCCTGGGAACCAATCTGGTGAAGAAATACTTAGAAATATGTTTCAAGTTGAAATGAGCTACTCAAAGTGGGTGGATGTGGCCATATTGCTAGGAATGGTAGTTGTGTGTAGGATTCTGTTCTTGGTTATCATCAAGAGCATTGAGAAGGCGAAGCCTATTGTTGCTGCCATGAATTGTCCTCAAGCAAAGTTCAAGTTCCCCAAAGTGGCCAGGAGCAATGAGATTGATTG 2024 0.4042 MKIAGRLASNTRQTGKILINGRRQALAYGTSAYVTEDDAILNTLTVGEAVYYSAQLQLPDSMSESEKKERADFTIREMGLQDAIDTRIGGWGSKGVSGGQKRRVSICIEILTHPRLLFLDEPTSGLDSAASYYVMSRIASLNQKDGIKRTIIASIHQPSYEIFQLFHNLCLLSSGKTVYFGPVSAANKFFSSNGFPCPTLQAPSDHFVKTINRDFDQDPEKGLSGGSTTEEAINILVQSYKSSDIFHRVQKEVVEIRKMDSDAMEKKNHAAFFTQCLILIKRSFVHMYREVGYYRLRMLIYGALALSLGTIFYDIGSGSESVQTRASLLVFVVTFLTFITVSGFPAFVEEMKVFERERLNGHYGVTAFIIGNTFSAIPFLLLMSIIPGAVVYYLVGLHQGHEHLLYFISVLFVSVLLVESLAMIVASVVPTFLMGIIYCSGILGVMMLDSGFYRLPKDIPKPFWRYPLHYISFHKYAYQGLFKNEFQGLSFPGNQSGEEILRNMFQVEMSYSKWVDVAILLGMVVVCRILFLVIIKSIEKAKPIVAAMNCPQAKFKFPKVARSNEID 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00883 567 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 3 555 - -
Bva13g00883 567 ProSitePatterns ABC transporters family signature. 96 110 IPR017871 GO:0005524
Bva13g00883 567 Pfam ABC-2 type transporter 156 211 IPR043926 GO:0140359
Bva13g00883 567 Pfam ABC transporter 13 124 IPR003439 GO:0005524
Bva13g00883 567 Gene3D - 1 191 IPR027417 -
Bva13g00883 567 PANTHER XENOBIOTIC-TRANSPORTING ATPASE-RELATED 3 555 - -
Bva13g00883 567 Pfam ABC-2 type transporter 274 486 IPR013525 GO:0016020|GO:0140359
Bva13g00883 567 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 188 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00883 Bva-Chr13 4124644 4127117 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00883 80 134 Calmodulin-binding Proteins AT2G36910 45.455 2.39e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00883 K05681 - gmx:100789571 894.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00883 13 4124644 4127117 Bva13g00883 13 4124644 4127117 ECH