Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00870 ATGGATAATCTTTGTTGCTTCAACTCTCTCACTCAGGTGATGGGAGGACGTTCTTCCTCTAGCTCGGGCAAGGGCAGGAGCCATCAGGGCCCAGTCAAGTATGGGTTTAGCCTAGTCAAAGGGAAAGCAAACCACCCAATGGAAGACTATCATGTATCAAAGTTTGTCCAGTTCAGAGGACATGAGCTTGGACTCTTTGCTATCTATGATGGACACTTGGGGGACAGTGTACCGGCCTATCTACAAAAGCATCTCTTTTCTAATATCTTAAAAGATGATGATTTCTGGACTGATCCGACCAGGACCATAATCAAAGCCTATGAGACCACAGATCAGGCAATTCTTTCTCATAGTGCTGATTTGGGACGAGGTGGATCAACTGCAGTCACTGCAATTCTTATGGATAATCGGAAGTTATGGGTAGCCAACGTTGGAGATTCACGAGCAGTTCTGTCAAGGGGAGGGCAGGCGATACAGATGAGTACTGATCATGAGCCCAACACTGAGCGGGGCAGCATTGAAAACAGAGGCGGCTTTGTCTCAAACATGCCAGGAGATGTTGCAAGAGTAAATGGGCAGCTTGCAGTTTCGCGAGCATTCGGAGACAAGAACCTGAAATCGCATTTGCGATCTGATCCTGACTTGAAGGATGCTGTTATTGACCAATACACTGAGCTTTTGATACTTGCAAGTGATGGCCTATGGAAGGTAATGGCAAATCAAGAAGCTGTTGATATTGCAAGAAGAGTAAAAGATCCTCAAAGGGCAGCCAAAAAACTGGTTGCTGAGGCATTAAACAGAGAAAGTAAAGATGACATTTCCTGCATTGTAATTCGTTTCAAgggatg 848 0.4493 MDNLCCFNSLTQVMGGRSSSSSGKGRSHQGPVKYGFSLVKGKANHPMEDYHVSKFVQFRGHELGLFAIYDGHLGDSVPAYLQKHLFSNILKDDDFWTDPTRTIIKAYETTDQAILSHSADLGRGGSTAVTAILMDNRKLWVANVGDSRAVLSRGGQAIQMSTDHEPNTERGSIENRGGFVSNMPGDVARVNGQLAVSRAFGDKNLKSHLRSDPDLKDAVIDQYTELLILASDGLWKVMANQEAVDIARRVKDPQRAAKKLVAEALNRESKDDISCIVIRFKG 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00870 282 SUPERFAMILY PP2C-like 29 281 IPR036457 -
Bva13g00870 282 Gene3D - 29 282 IPR036457 -
Bva13g00870 282 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Bva13g00870 282 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 1 281 - -
Bva13g00870 282 CDD PP2Cc 32 280 IPR001932 -
Bva13g00870 282 SMART PP2C_4 29 278 IPR001932 -
Bva13g00870 282 Pfam Protein phosphatase 2C 42 273 IPR001932 -
Bva13g00870 282 PANTHER PROTEIN PHOSPHATASE 2C 1 281 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00870 Bva-Chr13 4067656 4072326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00870 1 281 PP2C-type Phosphatase Gene Family AT1G22280 73.171 1.03e-154 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00870 K17506 - pvy:116142160 486.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00870 13 4067656 4072326 Bva14g01032 14 4956312 4959978 BWGD