Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00868 ATGGCAGAGCGTAGTTCTTATGGATTGGGTCCTCGATTAGATATTCAGCAATTACAATTTGAAGCCCAGCATCGGTGGTTGCGACCTGCtgaaatttgtgaaattcTTAGTAATTATCAGATGTTCCAAATAACGCCAGAACCTCCTGATAGGCCACCAAGTGGCTCACTCTTTCTCTTCAATCGGAAGGTTTTGAGGTATTTTAGAAAGGATGGTCAtaattggagaaagaaaaaagatggaaAGACAGTGAAGGAAGCAcatgaaaaattgaagGTGGGAAGTGTTGATGTGTTACACTGCTACTATGCCcatggagaagaaaatgaaagtttcCAGAGGCGTAGTTATTGGTTGCTTGAGCAGGATATGATGCACATAGTTTTTGTCCATTACTTGGAGGTTaagGGTAACAAGACAAATATTGGAGGAAATACAGATGCTGACGAAACTTCATCAGATTCCCAAAGGGGAAGCTCTTCATCTACTTTTCCTACAAATTATAACACTGTGCCTTCAAGAAGCACAGATGCCATGAGCCCAACTAGCACTTTGGCATCTTTATGTGAAGATGCTGATTCtgGGGATATTCGCCATGCAAGTCCTGGATTACACTCATTTCATGAGTCACCAAGTATGGGGAATGGTCTTCACAGGATTGATGACAGTTTGAGTAGCTCATATATTACGCATCCCTTTTCAGGTGACCTTGCACAGTCATCAATTTCTGGAACAGATTATATCCCACTTCTTCAGGGAGATAAATCTGGAGGAAGTGACACTGGTACATCTTTAATGGAGGGCCAAAAAGTAGGTGGCATGGCATCCTGGGGCAATGTCTTGGAACAATGTACAACTGGATTGCATACTGATCCTTCTCTTGGGTCACTTCCTTCTGTACCATCCAGTTCAATGGGTATCCTTGAACAAGAAGATACTGTTCTAGGTGAACTTTTAGCAAGCAAGAGTGCCTTCACTGATGGGTTAGGGAGCTCTCAGTCTTTACAGTCAAATTGGCAGATTCCTTTTGAGGACAATTTGGGAAACAAATGGCCCATGAGCCAATCACTGAGTTTGGAGATTGGATCTGATTTGAACACTGGTCATGATGCAAGTCCTGAAATTACTCCTGATTTGTTCACTTTTGACGATCAGCCAAAAGTACAGCCTGTGCAGGAAAACTTTCCAAAACAGCATACAGATGCACATTCTCAATTTCTACGGAAATCCGATTATGAGAATGAAGTTCCTGCCGAAGAAAGTTTCAACTATGCATTGACTATAAAGCGCACATTGTTAGATGGGGAGGAGAGCCTGAAGAAAGTTGACAGCTTCTCTCGGTGGATTACTAAAGAACTTGGAGAGGTGACTGATCTGCATACACAGTCCTCGCTTGGTATATCATGGAGCACGGATGAATCTGGGCATGTGATAGATGAAGCTTCATTGAGTCCTTCTCTCTCCCTTGACCAGCTGTTTAGCATACATGATTTTTTTCCAAAGAGGGCTTATACTGAATCAGAAACTGAGGTTTTGATTATTGGAACATTTTTGACAAGTGAACCAGCGGTGGCAAATTGTAAATGGTCATGTATGTTTGGGGAAGTTGAGGTTTCTGCTGAAGTTTTAGCCaatggtattttgagctgtcATGCTCCTCATCATAATGTGGGACGGGTTCCTTTCTATGTTACCTGTTCTAACAGGGTAGCTTGTAGTGAAGTGCGGGAATTTGATTATGTAGAAGGCTTTCCAAAAGGTTtagattttgaagattttcatAGCAGTTTTTTTTTGCGGCTGGAGAAGTTACTGTCTTCAAAATCAGTGTACCCTTCAAAGCAAACCTTTGTTGGTGAtttggagaaaagaaatataatttataagattcTTTCACTAAAGCAAGAAGCGGAGTATTCAGACAATGAAGAGGTGACCTTAGAGATGGATACATCCCAAGACAAAGTGAAGGAGCACCTATTTCACAGGAAGGTTAAAGAGAAGCTGTTCTCATGGCTTCTTCATAAAGTAGCTGAAGATGGTAAAGGGCCAAACGTATTAGATGAAGAGGGACAAGGTGTGCTACACTTAGCAGCTGCTCTTGGTTATGATTGGGCCATAAAACCAATCATAACTGCTGGAGTCAATATCAATTTCCGGGATGTAAATGGATGGACAGCTCTGCACTGGGCTGCATCCTGTGGCAGGGAGCGGACTGTTGCTGTCCTTGTTTCCATGGGTGCAGCTCCTGGAGTAGTGACAGATCCATCTCCAGCATTTCCTTCAGGTAGAACACCTGCAGATCTTGCTTCTAGTAATGGACATAAAGGAATCTCCGGTTTTCTTGCTGAGTATTCTCTAACTAGTCACCTAGCATCCCTCTCGGTGGATGATCTAAAGGAAGACACTGGGCCAGAAGCTTCAGGAACAAAAGCAGTACAGACTATTTCAGAAAGAACTGCAACACCTATGTTTTATGGTGATGCACCAGATGCTGTCATCCTTAAGGATTCTCTTACTGCTGTCCGTAATGCTACTCAAGCTGCTCATCGTATACATCAAGTGTACAGGATGCAATCATTTCAGAGGAAGCAGTTAGCTCAGTACAAAGATGAGGAGTTTGGATTGTCAGATCAGCAAGCTCTTTCCCTTGTTGCTTCTAAGGCAAGCAAGGCTGGACAAGGAGATGGGTATGCTCATACTGCTGCGATAcaaatacagaaaaaataCCGTGgttggaagaaaagaaaagaattccTGATAATTCGTCAAAGAATTGTCAAAATTCAGGCACACGTAAGGGGTCACCAGGTAAGGAAACAGTACAAGTCAGTCATCTGGTCTGTTGGAATTCTGGAGAAGGTCATACTACGCTGGAGGCGTAAGGGCAGTGGCTTGCGTGGATTTAGACAAGACACAGTTAACAAGGCTCCAATCCAAGAAGGTGGTCCTGCGAAAGAGGACgattatgattttcttaagGAAGGAAGGAAACAAAGTGAGGAAAAGTTCCAAAAGGCCCTGTTAAGAGTGAAGTCCATGGTTCAATATCCAGAGGCACGGGCTCAATACCGACGGCTGCTAAATGTTGTTGAAGACTTCCGCCAAACCAAGGCAGGCAACATGGATTTGACCAATACTGAAGAGACAGTGGATGGCGTAGAGGACCTGATTGATATTGACATGTTTTTAGATGATGACAATTTCTTACCCATAGCATTTGATTG 3227 0.4084 MAERSSYGLGPRLDIQQLQFEAQHRWLRPAEICEILSNYQMFQITPEPPDRPPSGSLFLFNRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENESFQRRSYWLLEQDMMHIVFVHYLEVKGNKTNIGGNTDADETSSDSQRGSSSSTFPTNYNTVPSRSTDAMSPTSTLASLCEDADSGDIRHASPGLHSFHESPSMGNGLHRIDDSLSSSYITHPFSGDLAQSSISGTDYIPLLQGDKSGGSDTGTSLMEGQKVGGMASWGNVLEQCTTGLHTDPSLGSLPSVPSSSMGILEQEDTVLGELLASKSAFTDGLGSSQSLQSNWQIPFEDNLGNKWPMSQSLSLEIGSDLNTGHDASPEITPDLFTFDDQPKVQPVQENFPKQHTDAHSQFLRKSDYENEVPAEESFNYALTIKRTLLDGEESLKKVDSFSRWITKELGEVTDLHTQSSLGISWSTDESGHVIDEASLSPSLSLDQLFSIHDFFPKRAYTESETEVLIIGTFLTSEPAVANCKWSCMFGEVEVSAEVLANGILSCHAPHHNVGRVPFYVTCSNRVACSEVREFDYVEGFPKGLDFEDFHSSFFLRLEKLLSSKSVYPSKQTFVGDLEKRNIIYKILSLKQEAEYSDNEEVTLEMDTSQDKVKEHLFHRKVKEKLFSWLLHKVAEDGKGPNVLDEEGQGVLHLAAALGYDWAIKPIITAGVNINFRDVNGWTALHWAASCGRERTVAVLVSMGAAPGVVTDPSPAFPSGRTPADLASSNGHKGISGFLAEYSLTSHLASLSVDDLKEDTGPEASGTKAVQTISERTATPMFYGDAPDAVILKDSLTAVRNATQAAHRIHQVYRMQSFQRKQLAQYKDEEFGLSDQQALSLVASKASKAGQGDGYAHTAAIQIQKKYRGWKKRKEFLIIRQRIVKIQAHVRGHQVRKQYKSVIWSVGILEKVILRWRRKGSGLRGFRQDTVNKAPIQEGGPAKEDDYDFLKEGRKQSEEKFQKALLRVKSMVQYPEARAQYRRLLNVVEDFRQTKAGNMDLTNTEETVDGVEDLIDIDMFLDDDNFLPIAFD 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00868 1075 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Bva13g00868 1075 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 856 948 IPR027417 -
Bva13g00868 1075 ProSiteProfiles Ankyrin repeat profile. 690 722 IPR002110 GO:0005515
Bva13g00868 1075 ProSiteProfiles Ankyrin repeat region circular profile. 723 748 - -
Bva13g00868 1075 ProSiteProfiles IQ motif profile. 899 928 IPR000048 GO:0005515
Bva13g00868 1075 SMART ANK_2a 762 791 IPR002110 GO:0005515
Bva13g00868 1075 SMART ANK_2a 723 752 IPR002110 GO:0005515
Bva13g00868 1075 SMART ANK_2a 690 719 IPR002110 GO:0005515
Bva13g00868 1075 MobiDBLite consensus disorder prediction 143 183 - -
Bva13g00868 1075 SMART CG_1_2 18 136 IPR005559 GO:0003677
Bva13g00868 1075 Gene3D Immunoglobulins 488 583 IPR013783 -
Bva13g00868 1075 SUPERFAMILY E set domains 495 581 IPR014756 -
Bva13g00868 1075 SMART iq_5 898 920 IPR000048 GO:0005515
Bva13g00868 1075 SMART iq_5 921 943 IPR000048 GO:0005515
Bva13g00868 1075 ProSiteProfiles Ankyrin repeat profile. 723 755 IPR002110 GO:0005515
Bva13g00868 1075 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 1075 - -
Bva13g00868 1075 SUPERFAMILY Ankyrin repeat 674 785 IPR036770 -
Bva13g00868 1075 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Bva13g00868 1075 Pfam Ankyrin repeats (3 copies) 695 784 IPR002110 GO:0005515
Bva13g00868 1075 Gene3D - 649 845 IPR036770 -
Bva13g00868 1075 ProSiteProfiles IQ motif profile. 922 946 IPR000048 GO:0005515
Bva13g00868 1075 Pfam IQ calmodulin-binding motif 924 943 IPR000048 GO:0005515
Bva13g00868 1075 Pfam IQ calmodulin-binding motif 901 919 IPR000048 GO:0005515
Bva13g00868 1075 Gene3D - 899 945 - -
Bva13g00868 1075 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 1 1075 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00868 Bva-Chr13 4053378 4061385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00868 1 1056 CAMTA Transcription Factor Family AT5G64220 53.645 0.0 1067
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Bva13g00868 CG-1 4e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00868 K21596 - gmx:100795682 1486.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00868 13 4053378 4061385 Bva14g01030 14 4939207 4948955 BWGD