Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00866 ATGGATTCTGCCTTGTCTGCCACATCGACGCAATTGGCCCTTTTCAAAGCTCTGAACCGCCATCTCGGCAAAGCTCCTCCTCTGTTTCAATGCATTTCGAAGCAGCTACACCCTCGGAGACTCTCTTCCGCTGCTTATAATTATGGCATACCGAGGCCCGAGCCTTTCTCTTCGCTGACCACTTTCTGTACGGCGGTGTACCCTGTACGGTGCCGTTTGCAGTGCGTTTCGAGCTCTGCTGCTTCGTTTGCTTCTGGTGGTGGTGATGGTCAGGACTCCAAATTGGTCGCCGAAGGGGCCGAAGAACTTCGGACACTTCCAACTGATGTTATTATTCTTGATGTTCGGGGAATGATGTGTGGGGGATGTGCAGATAACGTGAAAAGGATTCtagaaaataaaCCTCAAGTGTCATCTGCCAATGTAAATCTAACAGCAGAGACAGCCATAGTGTGGCCCATATCTGAAGCCAAAGCTGAACCAAATTGGCAAAAACAATTAGGGGAGGCACTTGCTGAGCATTTGACTAACTGCGGTTTCGAGTCTAGCCCTCGAGGTCAGGAAGATAGCAACTG 575 0.4939 MDSALSATSTQLALFKALNRHLGKAPPLFQCISKQLHPRRLSSAAYNYGIPRPEPFSSLTTFCTAVYPVRCRLQCVSSSAASFASGGGDGQDSKLVAEGAEELRTLPTDVIILDVRGMMCGGCADNVKRILENKPQVSSANVNLTAETAIVWPISEAKAEPNWQKQLGEALAEHLTNCGFESSPRGQEDSN 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00866 191 Pfam Heavy-metal-associated domain 113 180 IPR006121 GO:0046872
Bva13g00866 191 PANTHER ATP7, ISOFORM B 94 183 - -
Bva13g00866 191 PANTHER COPPER-TRANSPORTING ATPASE PAA1, CHLOROPLASTIC 94 183 - -
Bva13g00866 191 ProSitePatterns Heavy-metal-associated domain. 115 144 IPR017969 GO:0046872
Bva13g00866 191 ProSiteProfiles Heavy-metal-associated domain profile. 110 184 IPR006121 GO:0046872
Bva13g00866 191 Gene3D - 110 185 - -
Bva13g00866 191 CDD HMA 113 183 IPR006121 GO:0046872
Bva13g00866 191 SUPERFAMILY HMA, heavy metal-associated domain 110 185 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00866 Bva-Chr13 4047580 4050141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00866 12 185 Primary Pumps ATPases AT4G33520 44.500 2.62e-39 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00866 K17686 - qsu:112032422 195.282