LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva13g00865	ATGGCCGAGGAGGGAGGATCAGACAGAGGGGAGATCAATGGCGGATTTGGATCCGTGGACTCCGTGGAATCCAGGTGGGTTTTTCAGGACGAGGATGAGTCACAGACAGAGGAAGATGATGGTGATGCTCGCTACCTGACTACGTTGGATTCGGAGGATGAGGAAAATGGGGAGCAGAGACTGATTCGAACTGGTCCACGAATTGACTCATTCGATGTTGAAGCTCTTGAGGTTCCTGGTGCTCAGAGAAATGATTATGAGGATTTTAGTGGCATAAGGAGAATTGTATTGGCTTTCCAGACACTTGGTGTTGTGTTTGTGAAATATGTCCTGGTGGTTCTATGGGCCAATGATGATGGTGAAGGTGGTACTTTTGCCTTGTACTCCTTGATTTGTCGTCATGCTAAGGAAAGACTGGAGACTTCACTGACTATGAAGAAGATTCTACTGGTATTGGTACTTGCTGGTACTGCTATGGTGATAGCTAATGGGGTTGTTACACCAGCTATGTCAGTACTGTCATCTGTTGGTGGTTTAAAAGTTGGCGTCGATGCCATTGAGCAAGATGAAGTGGTAATGATTTCTGTTGCCTTCTTGGTCATTTTGTTCAGTGTACAGAAGTATGGAACAAGTAAAGTGGGACTTGCTGTAGGACCTGCTTTGTTGATATGGTTTTGTTCTCTTGCTGGCATTGGGATATACAACCTTGTCAAATATGATAGCAGCGTCTTAAGAGCATTTAACCCAATTCACATCTATTACTTTTTCAAGAGGAATTCAACTAAAGCATGGTATTCTCTTGGGGGTTGTCTTCTTTGTGCAACTGGTTCCGAGGCGATGTTTGCAGATCTTTGCTACTTCTCTGTTCAATCTGTTCAGCTTAgttttgtctttcttgttttgccATGCCTACTATTGGGTTATTTGGGTCAAGCTGCATACCTTATGCAAAACCATGCTGGTGCTGATCAAGTATTTTTTCATTCCGTTCCAAGTGGTGCATTCTGGCCAGTCTTACTTATTGCTAACATTGCTGCACTAATTGCAAGTCGGGCAATGACAACAGCCACCTTTTCGTTGGTTTTTGTCTGTACTATCTCCAACATTGATGAGATTGGAAATGCTTATGGCATTGCTGAGCTGGGAGTGATGATGATGACCACTATTTTAGTAACCCTTGTTATGCTTCTTATATGGCAGATACACATCATCATAGTATTGAGTTTTGCGGTAGTCTTCTTAGGGATTGAATTGACTTTCTTCTCATCAGTTTTGGGGAGTGTGGCTGATGGAAGTTGGATAATATTGGTTTTTTCGGTCATAATGTTTCTTATAATGTATGTATGGAATTATGGAAGCAAGCTCAAGTATGAAACTGAAGTAAAGCAAAAGCTGTCAATGGATTTAATGAGAGAATTAGGTTGCAATCTTGGAACAATACGAGCTCCTGGGATTGGTTTGGTCTACAATGAGTTGGTGAAAGGAATTCCAGGAATTTTTGGCCATTTTCTGACTACACTTCCAGCAATACACTCCATGATTATATTTGTGTCTATCAAGTATGTCCCTGTCCCTGTAGTGCCTCAGAGTGAAAGGTTCCTTTTCCGGAGAGTCTGCCCAAAAAGCTACCATATATTCCGTTGTATTGCCAGGTATGGTTACAAAGATGTTCGCAAAGAAAATCACCAGACTTTTGAGCAGTTGCTGATTGAGAGCCTAGAGAAGTTTATTCGTCGTGAGGCTCAGGAGCGGTCACTGGAGAGTGATGGAGATGATGATACAGATTTAGAGGACGAGCGTTCTGGTTCCAGGGTTCTCATAGCTCCAAACGGGAGTGTTTACTCACTCGGTGTTCCTCTACTGGCTGATTTCCAAGATACAAGCACCTCTATTACGGAAGCAAGCACATCGGAGGTGAGCCAAGCGCCTCCTGCTACTCCCTCAGCGGCTGATGCAGAACAGAGTTTTGAAAGGGAGTTATCTTTTATACACAAGGCTAAAGAATCAGGAGTTGTTTATCTTCTCGGTCATGGGGACATAAGAGCAAGGAAGGATTCCTGGTTTTTCAAGAAGctagttataaattatttttatgcttttctgAGAAAGAACTGCAGAAGGGGGATCACAACTTTGAGTGTACCCCACTCGCATCTGATTCAAGTTGGCATGACTTACATGGTTTG	2186	0.4222	MAEEGGSDRGEINGGFGSVDSVESRWVFQDEDESQTEEDDGDARYLTTLDSEDEENGEQRLIRTGPRIDSFDVEALEVPGAQRNDYEDFSGIRRIVLAFQTLGVVFVKYVLVVLWANDDGEGGTFALYSLICRHAKERLETSLTMKKILLVLVLAGTAMVIANGVVTPAMSVLSSVGGLKVGVDAIEQDEVVMISVAFLVILFSVQKYGTSKVGLAVGPALLIWFCSLAGIGIYNLVKYDSSVLRAFNPIHIYYFFKRNSTKAWYSLGGCLLCATGSEAMFADLCYFSVQSVQLSFVFLVLPCLLLGYLGQAAYLMQNHAGADQVFFHSVPSGAFWPVLLIANIAALIASRAMTTATFSLVFVCTISNIDEIGNAYGIAELGVMMMTTILVTLVMLLIWQIHIIIVLSFAVVFLGIELTFFSSVLGSVADGSWIILVFSVIMFLIMYVWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLVYNELVKGIPGIFGHFLTTLPAIHSMIIFVSIKYVPVPVVPQSERFLFRRVCPKSYHIFRCIARYGYKDVRKENHQTFEQLLIESLEKFIRREAQERSLESDGDDDTDLEDERSGSRVLIAPNGSVYSLGVPLLADFQDTSTSITEASTSEVSQAPPATPSAADAEQSFERELSFIHKAKESGVVYLLGHGDIRARKDSWFFKKLVINYFYAFLRKNCRRGITTLSVPHSHLIQVGMTYMV	728

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva13g00865	728	Pfam	K+ potassium transporter	88	361	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Bva13g00865	728	Pfam	K+ potassium transporter	362	556	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Bva13g00865	728	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	136	360	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Bva13g00865	728	MobiDBLite	consensus disorder prediction	632	651	-	-
	Bva13g00865	728	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	359	727	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Bva13g00865	728	MobiDBLite	consensus disorder prediction	632	648	-	-
	Bva13g00865	728	PANTHER	POTASSIUM TRANSPORTER	106	136	-	-
	Bva13g00865	728	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	106	136	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Bva13g00865	728	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	28	106	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Bva13g00865	728	MobiDBLite	consensus disorder prediction	1	58	-	-
	Bva13g00865	728	PANTHER	POTASSIUM TRANSPORTER	359	727	-	-
	Bva13g00865	728	MobiDBLite	consensus disorder prediction	40	58	-	-
	Bva13g00865	728	PANTHER	POTASSIUM TRANSPORTER	136	360	-	-
	Bva13g00865	728	PANTHER	POTASSIUM TRANSPORTER	28	106	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva13g00865	Bva-Chr13	4039498	4047343	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva13g00865	1	728	Inorganic Solute Cotransporters	AT5G09400	67.716	0.0	1098

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva13g00865	-		-	jre:109007673	1115.52

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bva13g00865	13	4039498	4047343	Bva14g01026	14	4911529	4917942	BWGD