Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00854 ATGGAGCTCAAGCGTGGCATAGCTAGAGCATTGGAGTACCTGCACCTCAATACCAAGGTTCATAACATTATCCCCAATAGCAACTTGAAGTGCTCAAACGTCCTGCTAGGTAAAAATGAGAGAGTTCTTGTTGCTGACTATGGCCTTTCCGCCCTTATAGCACAACCCATTGCAGCTCAATGCATGGTAGCTTACAAATCACCAGACTCTAGTTACGCAAGAAAGGTTACAGTGCAATCAGATGTGTGGAGCTGTGGTTGCATTCTCATAGAACTTTTAACCGGCAAGTTATCTGCACTCTCAGCTCCTTCTGGGGTCTGTTTTTGGGACCTTTGTAGCTGGGTTGAAAGGGCAGTGAGGGAAGGGTG 368 0.4674 MELKRGIARALEYLHLNTKVHNIIPNSNLKCSNVLLGKNERVLVADYGLSALIAQPIAAQCMVAYKSPDSSYARKVTVQSDVWSCGCILIELLTGKLSALSAPSGVCFWDLCSWVERAVREG 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00854 122 PANTHER OS05G0588300 PROTEIN 4 121 - -
Bva13g00854 122 PANTHER RECEPTOR-LIKE KINASE 4 121 - -
Bva13g00854 122 SUPERFAMILY Protein kinase-like (PK-like) 5 100 IPR011009 -
Bva13g00854 122 Gene3D Transferase(Phosphotransferase) domain 1 1 116 - -
Bva13g00854 122 ProSiteProfiles Protein kinase domain profile. 1 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00854 122 Pfam Protein kinase domain 5 97 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00854 Bva-Chr13 3996176 3996544 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00854 1 115 Receptor kinase-like Gene Family AT5G35390 40.870 4.83e-20 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva13g00854 Pkinase 5.5e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00854 - - gmx:100816006 164.851