Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00847 atggCAGCTGCAACTTCTGGTGCTCTGTTAAATGGGTTGGGCTCTTCCTTCTTGTCTGGTGGCAAGAGGAGCCAAACCCTCTTGGCTGCTGGAAAAATTGGTGCTGCTGTTACTCCTAGAAGGTTTGTTGcagttgctgctgctgctgctccAGCAAAGAAATCATGGATCCCTGCCATTAGAACTCGTGGCAACAGCTTCCTTGACCCAGAATGGCTCGATGGCTCGCTACCAGGTGACTATGGCTTCGATCCACTCGGGCTAGGGAGGGACCCAGCATTCCTGAAATGGTACAGAGAAGCTGAGCTCATTCACGGAAGGTGGGCAATGGCTGCTGTTGTGGGAATCTTCGTTGGTCAAGCATGGAGTGGAATCCCATGGTTTGAGGCTGGAGCTGACCCTGGTGCCATTGCTCCTTTCTCCTTTGGATCCCTTCTGGGTACCCAGTTGCTGCTCATGGGATGGGTCGAGAGCAAGAGATGGGTGGACTTCTTCGACCAAGATTCCCAGTCAGTGGAATGGGCCACGCCGTGGTCGAGGACCGCCGAGAACTTTGCCAATGCCACCGGCGAACAAGGCTATCCCGGCGGCAAATTCTTCGACCCTTTGGGGTTCGCCGGCACAATTCAGAATGGAGTTTATATTCCAGACAGAGACAAGCTGGAAAGACTGAAATTGGCCGAGATCAAGCATGCTAGGATTGCTATGTTGGCTATGCTCATTTTCTACTTTGAGGCTGGACAGGGAAAGACACCCCTCGGTGCTCTTGGCTTGTA 776 0.5103 MAAATSGALLNGLGSSFLSGGKRSQTLLAAGKIGAAVTPRRFVAVAAAAAPAKKSWIPAIRTRGNSFLDPEWLDGSLPGDYGFDPLGLGRDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFDQDSQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTIQNGVYIPDRDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00847 258 Gene3D Chlorophyll a/b binding protein domain 70 257 - -
Bva13g00847 258 SUPERFAMILY Chlorophyll a-b binding protein 68 258 - -
Bva13g00847 258 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 258 IPR001344 GO:0009765|GO:0016020
Bva13g00847 258 Coils Coil 258 258 - -
Bva13g00847 258 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP24 10A, CHLOROPLASTIC 1 258 - -
Bva13g00847 258 Pfam Chlorophyll A-B binding protein 70 246 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00847 Bva-Chr13 3968170 3969255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00847 1 258 Chloroplast and Mitochondria Gene Families AT1G15820 80.309 7.92e-147 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00847 K08917 - dcr:108202621 424.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00847 13 3968170 3969255 Bva14g01004 14 4803153 4804370 BWGD
Bva13g00847 13 3968170 3969255 Bva13g00847 13 3968170 3969255 ECH