Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00845 ATGGAAATTTCATCCCTAAGCTCAAACCAAAGGAATGGCATGTCATTTCAATGCCCTCCACTCTCATATAGACGTCAAGAAAGGCTTCTACCCATGCAGGTTTCATGCAGAGCTATAGATGCTGAGGACAAGAAGACCACCATTAATAATGGTAACAACTTCTACAAGCTATTATGTCTGAGTCCCAAAAATGCATCCATAGAAGAGATAAAGAGAGCTTATAGATCGATGGCGCTTCGGTATCACCCGGATGTGTGCCATGATCCTTCCATGAAGGAGGAATCAACAAGGATGTTTGTGCAGCTCAATGCAGCTTACAAGACATTGTCTGATCCTGTGCTTCGCCTAGAGTATGACTGTGATGTGGGTTTGAGGAGCAAAACGAGCATTGGTGATGAGAGATGGAGAAGTAGGTGGCAAGAGCAAATTGTTGAGTTGAAGAGAAGGTCGAATAGCCGTATGGCAAAGAAGGAGGGATCATGGAGCAGTAGAATAAGAGCTCAGAACAACAACTG 515 0.4408 MEISSLSSNQRNGMSFQCPPLSYRRQERLLPMQVSCRAIDAEDKKTTINNGNNFYKLLCLSPKNASIEEIKRAYRSMALRYHPDVCHDPSMKEESTRMFVQLNAAYKTLSDPVLRLEYDCDVGLRSKTSIGDERWRSRWQEQIVELKRRSNSRMAKKEGSWSSRIRAQNNN 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00845 171 SUPERFAMILY Chaperone J-domain 45 118 IPR036869 -
Bva13g00845 171 Gene3D DnaJ domain 40 151 IPR036869 -
Bva13g00845 171 CDD DnaJ 53 111 IPR001623 -
Bva13g00845 171 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 19 171 - -
Bva13g00845 171 ProSiteProfiles dnaJ domain profile. 53 122 IPR001623 -
Bva13g00845 171 Pfam DnaJ domain 53 119 IPR001623 -
Bva13g00845 171 SMART dnaj_3 52 114 IPR001623 -
Bva13g00845 171 PRINTS DnaJ domain signature 74 89 IPR001623 -
Bva13g00845 171 PRINTS DnaJ domain signature 56 74 IPR001623 -
Bva13g00845 171 PRINTS DnaJ domain signature 94 114 IPR001623 -
Bva13g00845 171 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 19 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00845 Bva-Chr13 3957654 3958169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00845 55 119 C2H2 Transcription Factor Family AT1G74250 41.791 2.28e-06 44.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00845 13 3957654 3958169 Bva14g00998 14 4777330 4777836 BWGD
Bva13g00845 13 3957654 3958169 Bva13g00845 13 3957654 3958169 ECH