Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00844 ATGAGTCAGTGTGTTAGTGAGGAGGTTGCAGCAAAGGCAATGGAGGAAATAAGAAGCGGGCCTCCTTCGCGGCATCATGGAGATACTTTGCCATACATTCACAAGGTGGGAGCTCCTCCTAAGCAAGATCTTCTCACAGAGATCAAGCATGCTGTGGAGGAAACTTTCTTCCCAGACAACCCTTTAGGCCATTTCAAGAACCAACCtcgaaaaagaaagtttttccTTGGCTTGCAAACAGTTTTCCCAATCTTTGAATGGGCAAGAGGCTACAATCTTGCCAAATTCAAGGGTGACTTTGTTTCTGGGCTAACCATTGCAAGTCTATGTATCCCTCAGGATATTGCATACGCAAAGCTTGCGAATTTGGATCCCAAGTATGGATTATACACCAGTTTTGTAGCTCCTCTTGTGCATGCCTTCATGGGAAGCTCAAGAGACATAGCGATTGGACCTGTAGCTGTGGTGTCCCTCTTGCTTGGAACTCTGCTGACGGACGAGATTCCTGACTATGGAAGTCATGATTACCTTCGTCTTGCATTTACAGCCACATTCTTCGCTGGGATCACCCAAATGGCACTTGGACTTTTGAGGCTTGGATTCTTGATCGATTTCTTATCTCACGCGGCCATAGTGGGATTCATGGGTGGAGCTGCCATTGCTATTGCCCTGCAGCAGCTCAAAGGTCTGCTTGGCATTCAACATTTCACCAAGAAGACTGATATTGTTTCTGTTATGGGCTCAGTTTGGACTAACGTGCACCACGGGTGGAATTGGCAGACAATAGTCATAGGACTTGCATTATTGGCTTTCCTTCTTGCGGCTAAGTGTATGGctaaaaagaacaagaaatatttttgggtGGCTGCAATTGCTCCTTTGATATCTGTTATAGTGTCCACCCTTTTCGTGTACCTTACACGCGCTGACGAGGAAGGAGTTTCAATCGTGAGACATATAGATAAGGGCGTGAATCCAATATCTGCAAGAGAAATCTTTTTCAGCGGAAAATATCTTGGTGCAGGAGTACGGATTGGTGTGGTAGCTGGGATGATAGCACTCACAGAAGCTATCGCCATTGGAAGAACATTTGCAGCCATGAAAGACTACCAAGTGGATGGAAACAAAGAGATGTTGGCAATGGGAACAATGAATGTTATTGGTTCAATGACATCTTGCTATGTAGCTACAGGATCCTTTTCTCGCTCAGCAGTGAACTTCATGGCTGGATGCCAAACTGCTGTATCAAACATCGTTATGTCTATGGTTGTATTGTTAACTGTGGTGCTCCTTACACCACTGTTTAAGTATACACCAAACACTGTGCTTGCTTCTATTATAATAGCTGCTGTGCTAGGCCTTGTGGACGTTAACGCAGCTGTTCTGCTGTggaaagttgacaaatttgaCTTTATAGCTTGCATGGGAGCCTTCTTTGGGGTTATTTTCAAGGATGTTGAGACTGGTCTTCTCGTCGCGGTGATTATATCATTTGCCAAAATCCTTTTACAAGTAACAAGGCCAAGGACTGCAGTGCTTGGGAGACTTCCAGGCACTACTGTCTACAGGAACATCCTGCAATACCCAAAAGCAACTCATGTTTCTGGCATGCTGATTATCAGAGTTGATTCTGCAATCTACTTCTCAAATTGCAACTATGTTAAGGATAGAATCCTGAGATGGGTGGCTGATGAGAATGCAGAAAGGGAAGAAGGAATAAAATACCTCGTTGTTGAAATGTCGCCTGTTACTGACATTGACACTAATGGCATCCATGCTTTGGAAGATCTATACAAGAGCCTCCAGAAAAGAGAGATTCAGCTTGCATTGGCAAATCCGGGGCCAATTGTAATAGAGAAGCTCCATGCATCCGACTTGGCAAACAAAATTGGGGAAGACAGCATATTTCTATCAGTGGCGGATGCCGTTGCCACTTTTGCTCCTAAGGCTGAACCTTG 1958 0.4356 MSQCVSEEVAAKAMEEIRSGPPSRHHGDTLPYIHKVGAPPKQDLLTEIKHAVEETFFPDNPLGHFKNQPRKRKFFLGLQTVFPIFEWARGYNLAKFKGDFVSGLTIASLCIPQDIAYAKLANLDPKYGLYTSFVAPLVHAFMGSSRDIAIGPVAVVSLLLGTLLTDEIPDYGSHDYLRLAFTATFFAGITQMALGLLRLGFLIDFLSHAAIVGFMGGAAIAIALQQLKGLLGIQHFTKKTDIVSVMGSVWTNVHHGWNWQTIVIGLALLAFLLAAKCMAKKNKKYFWVAAIAPLISVIVSTLFVYLTRADEEGVSIVRHIDKGVNPISAREIFFSGKYLGAGVRIGVVAGMIALTEAIAIGRTFAAMKDYQVDGNKEMLAMGTMNVIGSMTSCYVATGSFSRSAVNFMAGCQTAVSNIVMSMVVLLTVVLLTPLFKYTPNTVLASIIIAAVLGLVDVNAAVLLWKVDKFDFIACMGAFFGVIFKDVETGLLVAVIISFAKILLQVTRPRTAVLGRLPGTTVYRNILQYPKATHVSGMLIIRVDSAIYFSNCNYVKDRILRWVADENAEREEGIKYLVVEMSPVTDIDTNGIHALEDLYKSLQKREIQLALANPGPIVIEKLHASDLANKIGEDSIFLSVADAVATFAPKAEP 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00844 652 Pfam Sulfate permease family 96 475 IPR011547 GO:0016021
Bva13g00844 652 CDD STAS_SulP_like_sulfate_transporter 528 639 - -
Bva13g00844 652 TIGRFAM sulP: sulfate permease 83 642 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bva13g00844 652 ProSiteProfiles STAS domain profile. 527 646 IPR002645 -
Bva13g00844 652 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 18 650 - -
Bva13g00844 652 Pfam STAS domain 528 642 IPR002645 -
Bva13g00844 652 SUPERFAMILY SpoIIaa-like 529 646 IPR036513 -
Bva13g00844 652 Gene3D STAS domain 507 649 IPR036513 -
Bva13g00844 652 PANTHER SULFATE TRANSPORTER 18 650 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00844 Bva-Chr13 3953656 3956869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00844 18 649 Inorganic Solute Cotransporters AT1G22150 70.330 0.0 895
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00844 K17470 - gmx:100784124 1023.85