Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00841 ATGGAGAAGGAGCGGGAGCGGGTGATTTCGTTTTTCATcagttcttttcttctttcggcaattttattgtttgatttggTGCTCAAGGTTTCTGGCAATGCTGAAGGTGATGCCCTGAATACATTGAAGAGCAACTTGGTTGATCCTAACAATGTTCTTCAGAGCTGGGATTCTACCCTTGTCAATCCATGTACATGGTTTCATGTTACGTGCAATAGTGATAATAATGTGACACGAGTTGATCTTGGAAATGCACAACTTTCTGGTCAACTGGTTTCAAATCTTGGCCAGCTCACAAAGTTGGAGTACCTGGAACTTTATAGTAATAATATAACTGGAAAGATCCCACAGGAGCTTggaaatttgaaaaacttaGTGAGCTTGGATCTTTACACGAACAGCTTAACTGGACAGATACCAGCCACATTGGGCAACCTTAAAAAACTGCGTTTCCTGCGTCTCAACAATAACACCTTATCAGGAACCATTCCCATGAGATTGACAACCGTTGATTCACTACAAATCCTTGATCTTTCAACCAACAAGTTAACAGGAGTAATCCCAGTTACTGGTTCTTTTCAATCATTTACTGAACTAAGTTTTCGAAATAATTCTGGGTTGATTCAACAAAAAGTTGCCCCAGCGCCAATTGGTCCACCACCACCGTCTCCCCCTTCCTCAGGAATCAGTACTACTGGAGCTATTGCTGGAGGAGTTGCAGCTGGTGCCGCGCTTCTAATTGCAGCCCCTGCAATTGCGCTTGCTTGGTGGCGAAGAAGGAAACCGCACgataatttctttgatattcCTGCTGAGGAAGACCCTGAAGTTCACCTTGGTCAGCTTAAAAGGTTTTCACTGCGTGAGCTTATAGTTGCGACAGATAACTTTAGCAACAAAAACATTCTGGGTAGAGGTGGATTTGGCAAAGTTTATAAAGGACGCTTAGCTGATGGTAATCTAGTAGCAGTGAAAAGACTTAAAGAGGAGCACAGCCAAGGTGGTGAGCTGCAGTTTCAAACAGAAGTGGAAATGATCAGCATGGCTGTGCACCGTAATTTGCTTCGGCTGCGTGGTTTTTGCATGACACCTACTGAACGGTTGCTTGTGTATCCTTTCATGGCTAACGGAAGTGTAGCATCATGTTTACGAGATCGTCCTCAATCTCAACCTGCACTTGAATGGTCAATACGAAAGCGTATTTCACTGGGATCTGCTAGGGGGCTTGCTTATTTGCATGATCATTGTAACCCGAAGATTATTCATCGTGATGTGAAAGCTGCAAATATATTGTTGGATGAGGACTACGAAGCAGTCGTTGGAGACTTTGGTTTAGCAAAACTTATGGATTACAAAGATACTCATGTTACCACTGCTGTGCGTGGAACAATTGGGCACATAGCACCAGAGTACCTATCAACTGGAAAGTCTTCTGAGAAGACTGATGTTTTTGGATATGGTGTCATGCTTCTTGAAATCATAACTGGACAGAGAGCTTTTGATCTAGCTCGACTTGCCAACGACGACGATGTCATGTTGCTTGATTGGGTGAAAGGACTTCTGAAAGACAAGAGGTTGGAAGCACTGGTTGATACTGATTTACAGGGTAATTATATTGAAGAGGAGGTAGAACAGCTAATCCAAGTGGCCTTATTATGCACACAAGGATCTCCTATGGAGAGACCCAAGATGTCTGAGGTGGTCAGAATGCTTGAAGGTGATGGTTTGGCTGAAAAATGGGAGCAATGGCAAAGAGAGGAAGTGTTCCGCCAGGATTTTAACCTTAGCAATTTCCCTTTACTTGTAGACTCATTGTCACATATCCCACCAGATACACTATCAGGTCCTAGATG 1853 0.4199 MEKERERVISFFISSFLLSAILLFDLVLKVSGNAEGDALNTLKSNLVDPNNVLQSWDSTLVNPCTWFHVTCNSDNNVTRVDLGNAQLSGQLVSNLGQLTKLEYLELYSNNITGKIPQELGNLKNLVSLDLYTNSLTGQIPATLGNLKKLRFLRLNNNTLSGTIPMRLTTVDSLQILDLSTNKLTGVIPVTGSFQSFTELSFRNNSGLIQQKVAPAPIGPPPPSPPSSGISTTGAIAGGVAAGAALLIAAPAIALAWWRRRKPHDNFFDIPAEEDPEVHLGQLKRFSLRELIVATDNFSNKNILGRGGFGKVYKGRLADGNLVAVKRLKEEHSQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMANGSVASCLRDRPQSQPALEWSIRKRISLGSARGLAYLHDHCNPKIIHRDVKAANILLDEDYEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLEIITGQRAFDLARLANDDDVMLLDWVKGLLKDKRLEALVDTDLQGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAEKWEQWQREEVFRQDFNLSNFPLLVDSLSHIPPDTLSGPR 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00841 617 ProSitePatterns Protein kinases ATP-binding region signature. 303 325 IPR017441 GO:0005524
Bva13g00841 617 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 16 617 - -
Bva13g00841 617 SUPERFAMILY Protein kinase-like (PK-like) 276 572 IPR011009 -
Bva13g00841 617 SMART serkin_6 297 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00841 617 ProSiteProfiles Protein kinase domain profile. 297 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00841 617 Gene3D Ribonuclease Inhibitor 32 215 IPR032675 -
Bva13g00841 617 Gene3D Transferase(Phosphotransferase) domain 1 374 591 - -
Bva13g00841 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Bva13g00841 617 SUPERFAMILY L domain-like 35 204 - -
Bva13g00841 617 Pfam Protein kinase domain 298 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00841 617 Gene3D Phosphorylase Kinase; domain 1 266 373 - -
Bva13g00841 617 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Bva13g00841 617 PANTHER BNAA08G11770D PROTEIN 16 617 IPR031048 GO:0004675|GO:0005102|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00841 Bva-Chr13 3939243 3943813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00841 4 617 Receptor kinase-like Gene Family AT4G33430 73.463 0.0 912
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Bva13g00841 Pkinase 1.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00841 K13416 - gmx:100800522 934.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00841 13 3939243 3943813 Bva14g00993 14 4741388 4747890 BWGD
Bva13g00841 13 3939243 3943813 Bva13g00841 13 3939243 3943813 ECH