Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00834 ATGGGAGATAACAATGCGAATTTGCCACCCGGGTTTCGATTTTATCCATCAGATGAAGAGCTTGTAGTCCATTTTCTTCATAGAAAGGCTGCACTTTTGCCTTGCCATCCTGATGTTATCCCTGATCTTGAGCTATATCCCTATGATCCTTGGGAGCTTGAtgGGAAAGCTTTGGCTGAGGGGAACCAATGGTACTACTATAGCAGAAGAACACAAAATAGAGTCACTGGAAATGGGTTTTGGAAGGCAATGGGGATTGAAGAAGCAGTTGTGACAAGCTCAAGCAATAAGAgagttggaatgaagaaatatTACATGTTCTATATGGGAGAAGCATCTAATGGCATCAAAACTAATTGGATAATGGAAGAGTATCGTCTACCAGATTGTGCTTCTTCCTCTAGTAgatcatcaaaaagaaaatcacagcCAAAAGCAGATTATAGTAAATGGGTGATCTGTCGAGTTTACGAGCGAAATGGtgatggtgatgatgatgatgatggaagGGAGCTTTCTTGCTTGGATgaaattttcttgtctttaGATGATCTTGATGAAATAAGCTTGCCAAATTA 578 0.3478 MGDNNANLPPGFRFYPSDEELVVHFLHRKAALLPCHPDVIPDLELYPYDPWELDGKALAEGNQWYYYSRRTQNRVTGNGFWKAMGIEEAVVTSSSNKRVGMKKYYMFYMGEASNGIKTNWIMEEYRLPDCASSSSRSSKRKSQPKADYSKWVICRVYERNGDGDDDDDGRELSCLDEIFLSLDDLDEISLPN 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00834 192 PANTHER NAC DOMAIN-CONTAINING PROTEIN 104 5 189 - -
Bva13g00834 192 ProSiteProfiles NAC domain profile. 8 159 IPR003441 GO:0003677|GO:0006355
Bva13g00834 192 PANTHER NAC TRANSCRIPTION FACTOR 56 5 189 - -
Bva13g00834 192 Gene3D NAC domain 17 162 IPR036093 GO:0003677|GO:0006355
Bva13g00834 192 SUPERFAMILY NAC domain 5 158 IPR036093 GO:0003677|GO:0006355
Bva13g00834 192 Pfam No apical meristem (NAM) protein 9 127 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00834 Bva-Chr13 3894393 3895727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00834 1 160 NAC Transcription Factor Family AT1G61110 42.197 6.27e-43 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva13g00834 NAM 1.7e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00834 - - gmx:100170712 326.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00834 13 3894393 3895727 Bva14g00986 14 4694178 4695808 BWGD
Bva13g00834 13 3894393 3895727 Bva13g00834 13 3894393 3895727 ECH