Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00833 atgccGACGCCAATTGGATTaaaagggaagaagaaggaaactCTAAGAAGAAATTACGTCCTCTTACTTCTATCTTCTATTGATATTTGTGATGGAACGACATTTCTAGACTCCATTGTTAACCAGATTGAGACTCTCAACTTGAAGTATGGATGCAGGGTTCCATTAATTTTTCAGAACAGATTGAAGTATTCAGAATCCAACATTGAGCATTGATGCAGGGCTGGGAGACTCTCTTCGCAGAGGCCAGAAGCACTAGACCCAGGCTTCATTGAATCAGAATCAGCCATAAGACTCCAGACCGTGCATAAGAGGTTGGACAATATCTTGCCCAAAATCATCTACCCTTTAAGATTTTTCTTGaTGGATAacttgtccaagaatcaaatATTTGCTGCCCATGGGATTGCTGCAGCTGGGTCGGTCGCATTAGGAACAGCTTTTACTTATCCTCTGGATACCATTAAAGTTCTTACTCAGGTTGGTTCGAGTTCTGGCAAGAAATTGACTGCTGCCCAGGTTTTACAGAGAGTACAATTGATATCTGGAAATAGAGGCTTATATAGTGGTTTTGGCTGGTTGGCAGCAGGAAGGACTTTAGGTTTGGGAGCTCGATTTGGAGTGTATGAAATCTTGACGGCATTTTATAAAGATGGTAGAGAAGATAACTATGTCTATGTTGGTGAGGCCCTTATAGCAGGAATGGTAGCTGGGGCCACAGAGACGTTTGTAAGCTCTCCCTTTGAGCTCATCAAACTTCGTGCGCAGGTTGCCTCTGCTTCTTATGTGCGAAGTTCCACCTTCACTGTGGAAAAGGGAATGAATGCACCTTTAATTGCAAGATTACTTAGTGGCTGTAGTCCTGACAAGGCGGCATTGAACCGTTATGTTGGTCTTGTCTCCACCCTAAcaaccaaaaattcaaatgtgaAGGATTGTTTGCTAGAGTACCCATGGACAATGACAGGATCTGGGAAGCCACCATCAGTTTACAATGTTAGAAAGTTATCAGACATTATATCTTTAGAAGGATGGCGTACATTATGGAGAGGTATTCGTTCTGGAGTTGCTCGAGATTCTGTCTTTGCTGGTGTATTTTTTTCTAGTTGGCAATTCTTGCACCGAGCAATGCTTGATTGGAAGGCTGTAGAGATGTATCCTCCACCCAGGTCAGATGAAGAAATTGGTCCATTGTCTCCTTTGGCTGTCAGTCTTGCTGTTGGATTCTCAGGTTcagttgctgctgctgcttctcATAGTTTTGATACAGCAAGGAGTAGATCCCTATGCACTGTGTTGCCCAAGTATATCTCAATGGAGAGAAGGTTTCTAAAATGTAGACTACCAGGGAATAGGTTTGAGAGAACTACTGGGATTCATCCTTCTGACAGAGATCTCCTCTACCGTGGAATCTGGTTGCGGATGGCTCGCTCCGGGATTGCATCATTCTTGATTGTAGGAAGTTATTTGTTCATTATTGATAATGTTGCTTCTAGGTTGGCTTA 1505 0.4053 MPTPIGLKGKKKETLRRNYVLLLLSSIDICDGTTFLDSIVNQIETLNLKYGCRVPLIFQNRLKYSESNIEHCRAGRLSSQRPEALDPGFIESESAIRLQTVHKRLDNILPKIIYPLRFFLMDNLSKNQIFAAHGIAAAGSVALGTAFTYPLDTIKVLTQVGSSSGKKLTAAQVLQRVQLISGNRGLYSGFGWLAAGRTLGLGARFGVYEILTAFYKDGREDNYVYVGEALIAGMVAGATETFVSSPFELIKLRAQVASASYVRSSTFTVEKGMNAPLIARLLSGCSPDKAALNRYVGLVSTLTTKNSNVKDCLLEYPWTMTGSGKPPSVYNVRKLSDIISLEGWRTLWRGIRSGVARDSVFAGVFFSSWQFLHRAMLDWKAVEMYPPPRSDEEIGPLSPLAVSLAVGFSGSVAAAASHSFDTARSRSLCTVLPKYISMERRFLKCRLPGNRFERTTGIHPSDRDLLYRGIWLRMARSGIASFLIVGSYLFIIDNVASRLA 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00833 500 Pfam UTP--glucose-1-phosphate uridylyltransferase 25 63 IPR002618 GO:0070569
Bva13g00833 500 PANTHER CARRIER PROTEIN 122 495 - -
Bva13g00833 500 ProSiteProfiles Solute carrier (Solcar) repeat profile. 128 214 IPR018108 -
Bva13g00833 500 Pfam Mitochondrial carrier protein 130 216 IPR018108 -
Bva13g00833 500 Pfam Mitochondrial carrier protein 226 376 IPR018108 -
Bva13g00833 500 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 122 495 - -
Bva13g00833 500 Gene3D Mitochondrial carrier domain 130 498 IPR023395 -
Bva13g00833 500 ProSiteProfiles Solute carrier (Solcar) repeat profile. 224 375 IPR018108 -
Bva13g00833 500 SUPERFAMILY Mitochondrial carrier 131 488 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00833 Bva-Chr13 3883908 3891888 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00833 149 378 Antiporters AT1G79900 25.379 2.43e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00833 - - ahf:112734472 549.666