Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00816 ATGAAGGATAATTTAAGGAACATAGTACATGGATTAAAGCCAGTCATGCTAATGGTGATGGTGCAGATTGCATTTGCAGCTGTGAATGTGTTCTATAAGCTTGCCATAAACGATGGAATGAGCATGAGGGTTGCCACCGCATACCGTCTCATTTTTGCAACAGCTTTCACTGTTCCTCTTGCTCTTATCTCTGAAAGGAAGAACAGACCAAAGTTGAGTTGGAGGGTACTTTTCATGGCCTTTCTTTGTGGCTTATTTGGGGGaagtttatttcaaaatcttttctaTGGGGCCATCGCTTTGACGTCAGCAACATTCGCTTCAACTATCTATAACCTCATTCCAGCAATCACATTTGTCATGGCCATTTGCTTCCGTTacgaaaaattaaatttcgaAAAAGCAGCTGGAAAGGCCAAGGTGTTTGGAACTCTAGTGGGAATTGGTGGGGCAATGCTTCTCATCTTTTTCAAAGGTTTAAAGATTGATATTTGGCCTGTCCAAATCGACCTGTTGCACTCACATCGCCATCAAAGCAATGACTCTGGTCCAATAAGCTTCTTGGGTGTTCTATGTGCCATAGGAAGCTGCTTCTCTTATGCTTCGTGGCTCATTGTCCAGGCAAAGATGAGCAACGAATGTCCAAGCCATCTCTCAAGCACAGCGTTGATGTCTTTAATGGGAGCAATACAAGCCACTATCTTTGGTCTTATTGTTGATAGGGATTGGAATCAATGGAAATTGGGCTGGAATATTAGGCTTCTATCAGTTGCTTATTCGGGAATTGTGGCATCTGGAATAATGTTCATTGTCATATCTTGGTGTGTGCAGAAGAGAGGCCCATTATTTGCTTCTGTTTTTAACCCTCTAATGCTTGTGCTCGTAGCTATTGCCGGTTCTTTGATGCTCAACGAGCAATTATACTTAGGAAGTGTACTTGGAGCAGTGCTGATTGTGATTGGCTTGTACATGGTGCTATGGGGTAAGGGCAAAGAAATGAATGAAACGACCCAAAAAGAGACTTCCCTAGAATCAGAAGTACTTGAGATTGCTGTTAAATCATCCACTTGGGGGCATGATAAAGGCAACTACAGTAACACCAATAATACCAACAGTGTTGCCAATAAGGATGATTCAACAAAACAATG 1148 0.4111 MKDNLRNIVHGLKPVMLMVMVQIAFAAVNVFYKLAINDGMSMRVATAYRLIFATAFTVPLALISERKNRPKLSWRVLFMAFLCGLFGGSLFQNLFYGAIALTSATFASTIYNLIPAITFVMAICFRYEKLNFEKAAGKAKVFGTLVGIGGAMLLIFFKGLKIDIWPVQIDLLHSHRHQSNDSGPISFLGVLCAIGSCFSYASWLIVQAKMSNECPSHLSSTALMSLMGAIQATIFGLIVDRDWNQWKLGWNIRLLSVAYSGIVASGIMFIVISWCVQKRGPLFASVFNPLMLVLVAIAGSLMLNEQLYLGSVLGAVLIVIGLYMVLWGKGKEMNETTQKETSLESEVLEIAVKSSTWGHDKGNYSNTNNTNSVANKDDSTKQ 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00816 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 158 - -
Bva13g00816 382 MobiDBLite consensus disorder prediction 358 382 - -
Bva13g00816 382 MobiDBLite consensus disorder prediction 357 382 - -
Bva13g00816 382 PANTHER WAT1-RELATED PROTEIN 13 346 - -
Bva13g00816 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 331 - -
Bva13g00816 382 PANTHER WAT1-RELATED PROTEIN 13 346 IPR030184 GO:0016021|GO:0022857
Bva13g00816 382 Pfam EamA-like transporter family 13 155 IPR000620 GO:0016020|GO:0016021
Bva13g00816 382 Pfam EamA-like transporter family 188 326 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00816 Bva-Chr13 3819736 3825309 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00816 12 369 Nodulin-like Gene Family AT1G25270 41.783 1.93e-96 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00816 - - gmx:100809587 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00816 13 3819736 3825309 Bva14g00968 14 4609316 4611513 BWGD
Bva14g00969 14 4618330 4621224 Bva13g00816 13 3819736 3825309 BWGD