Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00806 ATGCCAAAGTCGAAACGAAATAGGGCAGTTACACTGTCgaagaccaaaaagaaagggagagaaCATAAAGAAGCAGTCGTTAGTGCTATACAGGAGGCTGCTGAGAAATACAACTCCGtgtatgtgttttcttttgagaacatgagaaatcaaagattCAAGGAGTTCAGGGAGCAGTTGAAATCTACTAGCAgGTTCTTTCTAGGCTCAAACAAAGTAATGCAGGTTGCCCTTGGTCGATCTGCTGCTAATGAGGTCAGACCCGGCCTTTATAAGGTTTCTAAGCTCTTGCGTGGAGATGCTGGAATGTGTTTTACAAATTTACCTAAGGAAGAAGTGCAAAGGCTATTTAATGAATTTGAGGAATATGATTATGCGAGAACTGGAAGTATTGCAACAGAAAAgGTGGATCTCAAAGAAGGTCCTCTGGAGCAGTTCACACATGAGATGGAGCCCTTTCTCAGGAAACAAGGCATGCCTGTCCGGTTAAATAAAGgCGTGGTGGAGCTTATCTCTGATTATATTGTTTGTGAGGAAGGAAAGCCCTTGTCACCAGAGGCAGCTCGTATACTACGTTTGCTGGGGATCAAGATGGCTACGTTCCGACTTAGCTTGATTTGCAGATGGAGTCCTGATGATTTTGAACTTTACATTGACAGGCCCGTCAACGCAGATGTTGAATCATCATA 689 0.3977 MPKSKRNRAVTLSKTKKKGREHKEAVVSAIQEAAEKYNSVYVFSFENMRNQRFKEFREQLKSTSRFFLGSNKVMQVALGRSAANEVRPGLYKVSKLLRGDAGMCFTNLPKEEVQRLFNEFEEYDYARTGSIATEKVDLKEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELISDYIVCEEGKPLSPEAARILRLLGIKMATFRLSLICRWSPDDFELYIDRPVNADVESS 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00806 229 Pfam Insertion domain in 60S ribosomal protein L10P 126 196 IPR040637 -
Bva13g00806 229 PANTHER RIBOSOME ASSEMBLY FACTOR MRT4 1 228 - -
Bva13g00806 229 PANTHER MRNA TURNOVER PROTEIN 4 MRTO4 1 228 - -
Bva13g00806 229 SUPERFAMILY Ribosomal protein L10-like 20 144 IPR043141 -
Bva13g00806 229 Gene3D - 30 211 IPR043141 -
Bva13g00806 229 Pfam Ribosomal protein L10 19 120 IPR001790 -
Bva13g00806 229 Gene3D - 125 198 IPR043164 -
Bva13g00806 229 CDD Ribosomal_P0_like 21 184 IPR033867 GO:0000027
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00806 21 222 Cytoplasmic Ribosomal Protein Gene Family AT3G11250 22.897 1.36e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00806 K14815 - zju:107427781 398.282