Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00801 ATGGAGGCCAAGAAGAAGCGTTCAAAGCCTAAGCTCCAGCGCCGAAACGCCATGAAGAATATCGATTACCAAGTGCCCAATTCAATAGAATTCGACGACATCACCTCATCCAGTTCCCGAACTAGCTCGTTGGATCGTTTTCCTTCTTTGCAGCACCAAACGAGCTTCCGTATCCTAGGCTCTGCAGATGAATTCAACCATATTTTCCGCAGTTTAGGACTTTCTGGTCCAGATGACTTCGAAATTCCAACTGGAGATTGGGAAGCCCAAAAGGCGCGCTCTCCTGGCTCTTGGGTTAAAGCTGAATCGATGGCTAAGCAAGCCGAAGATGAAATTTCTGCTAAATTTGAATCTGGGGTTGGGTTAAATAGCGGTATTGGGCTGAAAAATGCTTTCTTTCAAGGTAGTCAGGAAGGGTTGAATGTGAAGCGTACAGGTTCAAGAGTTCTGGGATGCGATAAGGATGGTGGCGGCGGAATTAAGGGTCCTAGGCCTCCTGTTCTTGCACCACCGCCAGTGATTTTGCGGCCGATTGTTGATAATGTGAGCTCTACTTGGGATTTAATGAGGTCTTTCGCTCCCCAAGACGATGGTGTTGTGGAGTCACCAATTGATGATGGTGGGGCTATTAGCTCTTCgggtgaagaagaagaagaagatcgGGGCATGGAAGATAATGAGGAAGAGTTATCTGTAGTGGGAAATAGGGGAAGTAGTCGTGTTTCAAGTCCTAGTTCATTTACATCCCCCAATGATGATAATGATGTTGGTGGTGGTGGTAAGGCATCTGGTATGGGTGATGAACCAATTTATAATGTGTCACCAAATGGATCATTTAGATGCACTTTCTCGTGGCAGAAGGGTGAGATTTTAGGGCAGGGGTCATTTGGAACGGTTTATGAAGGCTTTACAGATGATGGATTCTTTTTTGCTGTAAAAGAGGTGTCTTTGCTGGATCAAGGAAGCCAGGGAAAACAGAGCATTTTTCAACTTCAGCAGGAAATATCTCTTTTGAGTCAGTTTAAACATGAGAATATAGTTCGATATATTGGCACAGACAAGgatGAAAAGGCACTTTATATCTTCCTTGAACTTGTGACAAAAGGGTCATTGCAAAGACTCTATCAAAAATATCACTTGAGAGATTCTCAAGTTTCTGCATACACCAGGCAGATTTTAAGTGGCTTGAAGTATCTTCATGATCGTGATGTGGTTCACAGggACATCAAGTGTGCTAATATACTGGTTGATGCTAGTGGATCCGTAAAGCTTGCAGATTTTGGACTGGCAAAGGCAACCAAATTGAATGACGTTAAATCAAGCAAAGGCTCCCCATACTGGATGGCTCCCGAGGTTGTTAATTTAAAGAACCGCGGTTATGGGCTTGCAGCTGATATTTGGAGCTTAGGATGTACAGTATTAGAGATGTTGTCGCGGCAACCTCCTTACTCTGATTTGGAAGGAATGCAAGCACTATTTAGGATTGGCAGGGGTGTACCTCCAGATGTTCCTGACTCTTTGTCAAAAGATGCCCGGGATTTCATTCTTAAATGTTTACAAGTAAACCCAAATGACCGGCCGACCGCAACTCAGTTGATGGATCATCCATTTCTGAAAAGACCTCTTCTGTCTCCTTTTAGCCCTGCATCTCCACATGTGCGGTTCTG 1667 0.4355 MEAKKKRSKPKLQRRNAMKNIDYQVPNSIEFDDITSSSSRTSSLDRFPSLQHQTSFRILGSADEFNHIFRSLGLSGPDDFEIPTGDWEAQKARSPGSWVKAESMAKQAEDEISAKFESGVGLNSGIGLKNAFFQGSQEGLNVKRTGSRVLGCDKDGGGGIKGPRPPVLAPPPVILRPIVDNVSSTWDLMRSFAPQDDGVVESPIDDGGAISSSGEEEEEDRGMEDNEEELSVVGNRGSSRVSSPSSFTSPNDDNDVGGGGKASGMGDEPIYNVSPNGSFRCTFSWQKGEILGQGSFGTVYEGFTDDGFFFAVKEVSLLDQGSQGKQSIFQLQQEISLLSQFKHENIVRYIGTDKDEKALYIFLELVTKGSLQRLYQKYHLRDSQVSAYTRQILSGLKYLHDRDVVHRDIKCANILVDASGSVKLADFGLAKATKLNDVKSSKGSPYWMAPEVVNLKNRGYGLAADIWSLGCTVLEMLSRQPPYSDLEGMQALFRIGRGVPPDVPDSLSKDARDFILKCLQVNPNDRPTATQLMDHPFLKRPLLSPFSPASPHVRF 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00801 555 MobiDBLite consensus disorder prediction 211 226 - -
Bva13g00801 555 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 156 540 - -
Bva13g00801 555 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 3 111 - -
Bva13g00801 555 ProSitePatterns Protein kinases ATP-binding region signature. 291 313 IPR017441 GO:0005524
Bva13g00801 555 MobiDBLite consensus disorder prediction 232 253 - -
Bva13g00801 555 MobiDBLite consensus disorder prediction 1 23 - -
Bva13g00801 555 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 3 111 - -
Bva13g00801 555 Pfam Protein kinase domain 286 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00801 555 SMART serkin_6 285 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00801 555 Gene3D Transferase(Phosphotransferase) domain 1 284 549 - -
Bva13g00801 555 SUPERFAMILY Protein kinase-like (PK-like) 284 546 IPR011009 -
Bva13g00801 555 MobiDBLite consensus disorder prediction 196 269 - -
Bva13g00801 555 ProSitePatterns Serine/Threonine protein kinases active-site signature. 404 416 IPR008271 GO:0004672|GO:0006468
Bva13g00801 555 ProSiteProfiles Protein kinase domain profile. 285 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00801 555 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 156 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00801 Bva-Chr13 3756124 3762569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00801 11 542 MAP Kinase Kinase Kinase AT4G08500 46.880 3.30e-156 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bva13g00801 Pkinase 3e-70 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00801 13 3756124 3762569 Bva14g00950 14 4525341 4530171 BWGD
Bva13g00801 13 3756124 3762569 Bva13g00801 13 3756124 3762569 ECH