Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00800 ATGGGGAGCGAAGAAAAAGAGACTGAGGAGGAAATTGATCTCTCTTTGAAGATTGATTCTGAACAAAAtctgaaggaagaagaaacagCAAAGATAGATGATCATGAACAAGTAGAAATGGatgacaaggaagaaaaggCACCAGCAAAGGATGAGGAAGAAGCTACTGAAACCACAACAggtgaaaatgaagatgataCATCAATGGTTGAATTATCTTTACCACAAGACAGAAATCCAAGAGAGTTAAGTGTTTTGCAAATGGAGATGGATCGCAtgaaagaggaaaacaaaGTTCTAAGAAAAGAGGTGGAGCAAACAATGAAAGAATACCATGATCTTCGAATGAAATTTGCAGTGATCCAGCAgaacaataagaaaaagGATCCTCAAATTCCTCTCTCACTCCAAGACAATGCAAAAGCCAACAAGGAAGGACCACGGACAGTTCCAGAGATCTTTGGTGTCAAAATTCAAAGATCTCCATCTCCAGCAAACACTGATGATAGCATCAGTGAGAGTGAATTGGGTCTATCACTAAGGTTGCAACCAAGCACAAGTCAACATGATAAAGCACTGGAAGATAAAGAAGAGAATAAGGAAGAATTGGCTAGTTTTGCATCAGTGAAAAACAAGTTACAGAGAATTCATCATCATGAGTTGCCTGGCATTACTGCCCATGTTGCCTCTCCTCCCAATAGAAAGGCTAGGGTTTCGGTTAGAGCAAGATGTCAAGCAGCCACAaTGAATGATGGGTGCCAATGGAGAAAATATGGgcaaaaaattgcaaaaggaAATCCATGTCCACGAGCCTATTATCGTTGCACCGTGGCCCCAGGTTGCCCAGTTAGGAAACAGGTGCAAAGATGCCAAGAGGACATGTCCATTCTCATTACGACCTATGAGGGAACACATAACCATCCACTGCCTGTTGGTGCAACTGCCATGGCTTCTACTGCTTCTGCTGCAGCTTCCTTTACGTTATTGGATTCAAGCAATCCTATTTCAGATGGCTACACCCAAACGAATCTTCCTTTCAACAGCTATAATCCTATAAACCCTATCTGGAGCATAAACCCTAATGACCATTCCAAAGGGATTGTCCTTGATCTTACAAATAATCTCAATGAATTCACACCAAGATTTCCTGTGGCTGGTAGCTCTTCCAGTTCAGCAGCTCAGCAGggtttattttcttggatGCCAAACAAGTCAAGTTATTATCATCAGAGTGGGAATGCCAATATTAGCATGAATAGTTTTCCCATTCCCAGCCCAAGATCATTGGATGAAAGGATTtggaaaggagaagaaaataaaccaCTAGCTGATCATAATGTGGGTGCAATTGCCTTAGATCCTAATTTTAGGGTTGCAGTGGCAGCAGCCATAACATCATTGTTCAATAAAGAGAGCCACCACTCTAGCCATCCCATAGGGAGTACTTCTTTTGGTGCTAATAGGAATAATGGGCAAAAATA 1481 0.3801 MGSEEKETEEEIDLSLKIDSEQNLKEEETAKIDDHEQVEMDDKEEKAPAKDEEEATETTTGENEDDTSMVELSLPQDRNPRELSVLQMEMDRMKEENKVLRKEVEQTMKEYHDLRMKFAVIQQNNKKKDPQIPLSLQDNAKANKEGPRTVPEIFGVKIQRSPSPANTDDSISESELGLSLRLQPSTSQHDKALEDKEENKEELASFASVKNKLQRIHHHELPGITAHVASPPNRKARVSVRARCQAATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCQEDMSILITTYEGTHNHPLPVGATAMASTASAAASFTLLDSSNPISDGYTQTNLPFNSYNPINPIWSINPNDHSKGIVLDLTNNLNEFTPRFPVAGSSSSSAAQQGLFSWMPNKSSYYHQSGNANISMNSFPIPSPRSLDERIWKGEENKPLADHNVGAIALDPNFRVAVAAAITSLFNKESHHSSHPIGSTSFGANRNNGQK 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00800 493 MobiDBLite consensus disorder prediction 129 197 - -
Bva13g00800 493 SMART WRKY_cls 249 309 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva13g00800 493 PANTHER WRKY TRANSCRIPTION FACTOR 9-RELATED 11 477 - -
Bva13g00800 493 Coils Coil 83 117 - -
Bva13g00800 493 MobiDBLite consensus disorder prediction 471 493 - -
Bva13g00800 493 Gene3D WRKY domain 234 311 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva13g00800 493 SUPERFAMILY WRKY DNA-binding domain 242 310 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva13g00800 493 MobiDBLite consensus disorder prediction 160 187 - -
Bva13g00800 493 ProSiteProfiles WRKY domain profile. 244 310 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva13g00800 493 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 11 477 IPR044810 GO:0003700
Bva13g00800 493 Pfam WRKY DNA -binding domain 250 308 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva13g00800 493 Coils Coil 18 38 - -
Bva13g00800 493 MobiDBLite consensus disorder prediction 1 81 - -
Bva13g00800 493 MobiDBLite consensus disorder prediction 10 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00800 Bva-Chr13 3751455 3753675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00800 35 366 WRKY Transcription Factor Family AT1G68150 47.592 1.33e-79 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva13g00800 WRKY 9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00800 - - gmx:100820209 533.872