Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00778 ATGGGAAGAAGGAATGGAGGAAGGTCACTGCAAGAAATTCTTCGTCGTCGGCTTGAGTCCTGCAAATCCAGGTACTCAACCATTGATGAAATTGTGAACCATCTTCGCTCAACTTATCCAGATTACCAACGAACCAAGCAGCAAACTTTAACTAGGTTTGTTCAGGAAGCTTTAGATTCATCTAAGAGGGAGAACAAGCAGTTTAATAGAAACCCTAGTACTCCTATACTGAAAGATGACACCCCGGAAAATGATGAGGATGAAGAAGGGATTCAAACTTCATTTCGGAAGAGGCGAAAGAGAATTGATGAGAGTGAAGAGAAATTGCAACACATGGAGAACTTGCACCTTAGAAGGATACAGAGAAATCAGGGCAACTCATCAACATCATCTGCTTCGACTTCTAGCTCAGCTTCATCAGAGTCTGAGGAGAGTGATGGCGAAGATGGGGCAGTATCTACATCAGAGGATGCAATTTATGGAGAGAAATTGGAGCCTAGATTTGACTTGATGAAGACAATGTTGCGAGCCTCTTATACAGGATCGAAAAACACAAAACCCATTTTAGAGGAGAAGAATATTGAATTGGAGGAGGCTAATAATAGGAAGAAAACTAAGATTGATGCTTTGAATGGGGGTGGAAGTGATGTAAAAACAGGTTCAGAATCAGGGATGCAGTTGAGGGGTTCAGTTTCAAAGGATGGTGGTGATGTGgagatgaaagagaaagatgggCCAAGGTTTAGAGATTTGGGTGGGATGAGGGAGGTGGTAGAGGAATTGAAGATGGAGGTGATTGTGCCGTTGTGCCATCCAGAGTTGCCAATAAGGTTAGGAGTTAGGCCAATGGCAGGGATATTGTTGCACGGGCCACCCGGCTGTGGGAAAACCAAACTGGCTCATGCGATAGCTAATGAGACCGGTCTTCCATTCTATAAGATATCAGCTACTGAAGTGGTCTCAGGAGTCTCAGGTGCTtctgaagaaaatattagagAGCTTTTCTCTAAAGCATACAGGACTGCCCCATCAATTGTCTTTATTGATGAGATTGATGCTATTGCttcaaaaagagagaatttaCAACGTGAGATGGAGAAAAGAATTGTGACACAATTAATGACTTCCATGGACCAATCACAAGCACTTCTACAACCAGGTGATAATTCACAAAGTTCTAATGGCCAACCTGGCTACGTTCTTGTCATTGGAGCTACAAATAGGCCTGATGCTGTTGACCCTGCCTTAAGAAGGCCTGGACGATTTGATCGTGAGATTGTCCTAGGAATACCTGATGAATGTGCAAGGGAGGAGATCCTTTCTGTTCTTACTCACAATCTCAAGCTTGAGGGTACATTCGATCTTAGAAAGATAGCCAGGTCTACACCTGGCTTTGTTGGAGCTGATTTGTCAGCTCTGGTTAACAAGGCTGGTAACCTGGCAATGAAGAGGATTATTGATGAAAGGAAACTTGAATTATCTCAAGATCTTATGGATGAGTATTCTGAGGACTGGTGGAGGAAACCTTGGTTGCCAGAAGAGATGGACAAGCTTGCCATCAAAATGTCTGATTTTGAGGAAGCAGTCAAAATGGTGCAACCTTCATCAAGAAGAGAAGGATTCTCATCCATTCCTAACGTAAAATGGGAAGATGTTGGTGGGCTTGATCTTCTTAGGCAGGAGTTTGATCGGTACATAGTTAGACGTATAAAATATCCAGAGGATTATGAGgGATTTGGGATGGATCTTGAGACTGGATTCTTACTTTATGGACCACCAGGTTGCGGTAAAACACTGATTGCCAAAGCCGTTGCCAATGAGGCAGGTgctaattttatacatattaagGGCCCTGAacttctaaataaatatgttggAGAAAGTGAGCTAGCAGTTCGGACATTGTTTAGTCGTGCAAGGACATGTTCACCTTGCATACTTTTCTTTGATGAGGTGGATGCTTTGACAACAAAACGTGGCAAAGAAGGTGGATGGGTTGTTGAACGGCTATTGAACCAGCTACTTATCGAGTTAGATGGTGCAGAGCAGCGGCGGGGTGTATTTGTTATTGGTGCTACAAATCgaCCTGAGGTGATGGACCGAGCTGTTCTTCGGCCTGGTAGATTTGGTAAACTGCTTTATGTTCCTCTGCCTAGCCCAGATGAGCGAGGTTTGATCTTAAAAGCTCTTGCGAGGAAGAAGCCTATCGATGACAGCGTTGATTTGAGTGTTATTGGAAGAATGGAGGCTTGTGAAAATTATAGTGGGGCTGATCTTGCTGCACTGATGAATGAAGCAGCAATGGCTGctcttgaagaaaaattgactTCAAGTGAAAGAACTTGTGATACTTGTACCATCAATGCAGCTCATTTTGAGGTAGCACTTAATAAAATCTCTCCGTCTGTGTCTGACATGCAAAAACAGTACTATCAGCGTTTATCGCAGAGTTTTAAAGCAGCATG 2465 0.4162 MGRRNGGRSLQEILRRRLESCKSRYSTIDEIVNHLRSTYPDYQRTKQQTLTRFVQEALDSSKRENKQFNRNPSTPILKDDTPENDEDEEGIQTSFRKRRKRIDESEEKLQHMENLHLRRIQRNQGNSSTSSASTSSSASSESEESDGEDGAVSTSEDAIYGEKLEPRFDLMKTMLRASYTGSKNTKPILEEKNIELEEANNRKKTKIDALNGGGSDVKTGSESGMQLRGSVSKDGGDVEMKEKDGPRFRDLGGMREVVEELKMEVIVPLCHPELPIRLGVRPMAGILLHGPPGCGKTKLAHAIANETGLPFYKISATEVVSGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIASKRENLQREMEKRIVTQLMTSMDQSQALLQPGDNSQSSNGQPGYVLVIGATNRPDAVDPALRRPGRFDREIVLGIPDECAREEILSVLTHNLKLEGTFDLRKIARSTPGFVGADLSALVNKAGNLAMKRIIDERKLELSQDLMDEYSEDWWRKPWLPEEMDKLAIKMSDFEEAVKMVQPSSRREGFSSIPNVKWEDVGGLDLLRQEFDRYIVRRIKYPEDYEGFGMDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGAEQRRGVFVIGATNRPEVMDRAVLRPGRFGKLLYVPLPSPDERGLILKALARKKPIDDSVDLSVIGRMEACENYSGADLAALMNEAAMAALEEKLTSSERTCDTCTINAAHFEVALNKISPSVSDMQKQYYQRLSQSFKAA 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00778 821 MobiDBLite consensus disorder prediction 89 103 - -
Bva13g00778 821 PANTHER NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE 30 818 - -
Bva13g00778 821 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 248 538 IPR027417 -
Bva13g00778 821 MobiDBLite consensus disorder prediction 118 160 - -
Bva13g00778 821 Gene3D - 545 811 IPR027417 -
Bva13g00778 821 Pfam Nucleolin binding domain 18 65 IPR031996 -
Bva13g00778 821 Gene3D - 237 429 IPR027417 -
Bva13g00778 821 ProSitePatterns AAA-protein family signature. 687 705 IPR003960 GO:0005524|GO:0016887
Bva13g00778 821 SMART AAA_5 583 719 IPR003593 -
Bva13g00778 821 SMART AAA_5 282 432 IPR003593 -
Bva13g00778 821 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 545 817 IPR027417 -
Bva13g00778 821 Gene3D - 718 797 - -
Bva13g00778 821 CDD AAA 586 717 - -
Bva13g00778 821 Coils Coil 95 115 - -
Bva13g00778 821 Pfam ATPase family associated with various cellular activities (AAA) 588 716 IPR003959 GO:0005524|GO:0016887
Bva13g00778 821 Pfam ATPase family associated with various cellular activities (AAA) 286 428 IPR003959 GO:0005524|GO:0016887
Bva13g00778 821 PANTHER AAA-FAMILY ATPASE 30 818 - -
Bva13g00778 821 MobiDBLite consensus disorder prediction 119 141 - -
Bva13g00778 821 Gene3D - 431 539 - -
Bva13g00778 821 ProSitePatterns AAA-protein family signature. 400 418 IPR003960 GO:0005524|GO:0016887
Bva13g00778 821 Coils Coil 189 209 - -
Bva13g00778 821 MobiDBLite consensus disorder prediction 207 247 - -
Bva13g00778 821 Pfam AAA+ lid domain 739 777 IPR041569 -
Bva13g00778 821 Pfam AAA+ lid domain 453 488 IPR041569 -
Bva13g00778 821 CDD AAA 281 429 - -
Bva13g00778 821 MobiDBLite consensus disorder prediction 59 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00778 Bva-Chr13 3658476 3663881 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00778 518 819 Calmodulin-binding Proteins AT3G56690 43.421 8.30e-70 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00778 K14571 - gmx:100809594 1165.98