Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00770 ATGGGTATGAGGCAGAAGCTAGCGATGTTGCTACTTACGCTCTTTGCCATGTTTTCAACTCTAGGATCAGCAGCTCCATCCCCTTCTACTTCCACCACCAACGCAACCAGATGCCCTATGGATATGAATTATGTGCTGAGAATTCCATGGAATTCCTCCACGTGCCATAGCATCAATGAAGCAAGCCTAACTATTTGTTGCCAAACGTTGATATCTCTTATTGGCGTAGCATTTGCCAACCACCTGAAGGAAACCTCTCTTTTCAATCTCCAAAATGTGTCGACCTCCACCTCCTGCCTTGAAGACCTCCAATCCAAGCTCACAGCTCTGTCCCTTCCCAATAACCTCGTTTCCACTTGCTTTGACCCTCTTCAATTTGTCATCTCCCCCAACGTCTGCGCCCATATTCAGAATACCCAAGATTGGATCAACACACTTGGTCAGAATACATCTCTTGACAGTGCCTGCAAAGGAGACCTCACTGATCTTTCTAAGTGTGATGCCTGCTGGGCCGCTGGTTTGCAGATACAGACGAACCTAACCTCTATTGATGGTAATTCTACCCATTCCAAAGATTGCTATTACTTTGCTATTCTTTATGCTGCTGGAATTGTGAATGAGTTTGGACCTGAAAGCCATGGTGTATTGAATTGCATATTTGCTTTGTCTGTTAATTCCCAAGTGGGTTCTGAAGGAAAGACCCACCAGGCTCTTGTGTTTGGGTTAACTGGAGCTAGTGTTGCATTGCTGGTTACATTTACTTTGTTGGGTTTGTATATCTGGTATGATAGGAAGTGGAGGAGGAAAAAGTTTGGAGCTTCCCCATTTGATTTTGATCCAGAAGAACATGGGTCTAGGTCGAGAATGAGACCCAATAATGTATCAATTTGGTTCAAAATTGAGGAGCTTGAGAAGGCTACAAACAATTTTTCAACTAAGAATTTCGTAGGGCGAGGAGGGTTTGGAATGGTGTACAAGGGAGTTTTGCCTGATGGAACAACGGTTGCAATCAAGAGGATTTTAGAATCTGATTTTCAAGGGGATGTTGAGTTCTGCTATGAGGTTGAGATCATTAGTAATCTTAAGCACAGGAATCTGCTGCCACTTAGAGGGTGCTGTGTGGTTGATGAAGATGAGAATTATGATGAGAAAGCAGGTCAGAGGTATCTTGTTTATGATTACATGCCAAATGGTAACCTTGAACATCATCTTTTCCCATCAACGGAGAATCTGAATGCAAAGATTCCACTGACTTGGCCTCAAAGAAAAAGCATAATTTTGGATGTTGCAAGGGGATTGGATTATTTGCACTATGGAATTAAACCTGCAATTTATCACAGAGACATCAAAGCCACCAATATACTACTCGATGCAGATATGAGGGCAAGGGTTGCGGATTTTGGGCTTGCCAAGCAGAGCAGAGAAGGCCAGTCTCATCTCACTACTCGAGTAGCCGGAACTCATGGGTACCTTGCCCCTGAATATGCACTTTATGGTCAGCTAACTGAGAAGAGTGATGTGTATAGTTTTGGTGTGGTTGTTTTGGAAATAATGTGTGGGAGAAAAGCTCTCGACTTGTCCTTGTCTGGATCTCCGCAAGCATTCTTGATCACAGATTGGGCTTGGTCATTGGTGAAAGCTGGAAAGGTAGAGCAGGCTTTGGATGCTTCCCTGGTAAAGGATGAGAATTCTGCTAGTTCAAATCCAAAGAGCATAATGGAAAGATTTTTGCTGGTGGGAATTCTGTGTTCTCATGTAATGGTTGCTTTAAGGCCAACAATTTCAGAAGCATTGAAGATGCTGGAAGGTGATATTGAGGTTCCACAGATCCCAGATAGGCCTATGCCTCTTGGGCACCCTTCATTTTACAATGATGCTAGTACTTTTACCACATCTCCAGCATTAAGTGGCACACATTTGATCAGCGGAGACATGTTCAGGTA 1943 0.4349 MGMRQKLAMLLLTLFAMFSTLGSAAPSPSTSTTNATRCPMDMNYVLRIPWNSSTCHSINEASLTICCQTLISLIGVAFANHLKETSLFNLQNVSTSTSCLEDLQSKLTALSLPNNLVSTCFDPLQFVISPNVCAHIQNTQDWINTLGQNTSLDSACKGDLTDLSKCDACWAAGLQIQTNLTSIDGNSTHSKDCYYFAILYAAGIVNEFGPESHGVLNCIFALSVNSQVGSEGKTHQALVFGLTGASVALLVTFTLLGLYIWYDRKWRRKKFGASPFDFDPEEHGSRSRMRPNNVSIWFKIEELEKATNNFSTKNFVGRGGFGMVYKGVLPDGTTVAIKRILESDFQGDVEFCYEVEIISNLKHRNLLPLRGCCVVDEDENYDEKAGQRYLVYDYMPNGNLEHHLFPSTENLNAKIPLTWPQRKSIILDVARGLDYLHYGIKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVVLEIMCGRKALDLSLSGSPQAFLITDWAWSLVKAGKVEQALDASLVKDENSASSNPKSIMERFLLVGILCSHVMVALRPTISEALKMLEGDIEVPQIPDRPMPLGHPSFYNDASTFTTSPALSGTHLISGDMFR 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00770 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Bva13g00770 647 CDD STKc_IRAK 316 603 - -
Bva13g00770 647 Gene3D Transferase(Phosphotransferase) domain 1 395 609 - -
Bva13g00770 647 ProSiteProfiles Protein kinase domain profile. 310 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00770 647 Pfam SPARK 34 193 IPR043891 -
Bva13g00770 647 SUPERFAMILY Protein kinase-like (PK-like) 286 602 IPR011009 -
Bva13g00770 647 Gene3D Phosphorylase Kinase; domain 1 279 394 - -
Bva13g00770 647 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 623 - -
Bva13g00770 647 Pfam Protein kinase domain 311 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00770 647 ProSitePatterns Protein kinases ATP-binding region signature. 316 338 IPR017441 GO:0005524
Bva13g00770 647 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 32 623 - -
Bva13g00770 647 SMART serkin_6 310 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00770 Bva-Chr13 3621093 3623769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00770 25 647 Receptor kinase-like Gene Family AT1G11050 64.537 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Bva13g00770 Pkinase 1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00770 - - gmx:100806560 973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00770 13 3621093 3623769 Bva13g00770 13 3621093 3623769 ECH