Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00768 aTGGAGAGGAATTATAGTTCACACAATCTTCACTTCTCATCTGGCTTGAGAAAGAGTTACAGGAAACAGCAGCATGGCCATTCAGGGGATCAGCCTCATCTTGATCAGAATGATTCTATGTCTTCATCATCTTTCAATCTGCACAATGTTTCAAAGCTCATCCTTCCACCACTGGGTGTCTCGAGTAGCAACCAGAATCAAGTTGATCCAAAAGGGTGGATCATATCTCCAATGGATTCAAGATACAGGTGTTGGGAGAGTTTCATGGTGATCCTGGTGGCTTATACTGCATGGGTTTACCCCTTTGAAGTTGCATTTCTGAACACAACAACAAACACAAAACTCTACATAGTTGACAACATTGTTGATCTTTTCTTTGCTGTTGACATCTTTTTGACCTTCTTTGTGGCTTATATTGATAGAAGAACTCAGTTACTTGTGAGAGACTCAAAGAAGATTGCCGTCAGATACCTATCGACATGGTTCGTGATGGATGTGGCATCAACAATACCATACGAGGCTGTTGGGTATTTATTAACAGGCAAACACAGGATAGGTCTCGTTTACTACCTTCTGGGCACCCTCAGATTTTGGAGACTCAGAAGGGTGAAGCAATATTTTACCAGGCTTGAGAAGGACATCAGGTTCAGCTATTTTTGGGTTCGCTGTGCTAGGCTTCTATCTGTGACTCTATTTTCAGTTCACTGTGCTGGGTGCCTCTACTACCTGCTAGCTGATCGTTACCCCCACCAAGGAAAGACATGGATTGGAGCAGTGATGCCAAATTTCAGAGAGACAAGCCTTAAAATCAGATACATCTCGGCCATGTATTGGTCCATCACCACCATGTCCACAGTTGGTTATGGTGATCTCCATGCTGTGAACACCGTGGAAATGATATTCATCATCTTCTACATGTTCTTCAATCTTGGCCTAACTGCTTACTTGATTGGCAACATGACAAATCTTGTTGTTGAAGGAACCCGTCGTACCATGGAATTTAGAGATAGCATTGAAGCTGCATCAAATTTTGTGGGCCGAAATCAGTTGCCTTCAAGGTTGAAAGAGCAAATACTGGCTTATATGTGTCTAAGATTCAAGGCCGAGAGCTTGAATCAGAATCACCTCATTGAACAGCTGCCAAAATCCATCTGCAAGAGCATTGGCCAGTATCTGTTTTTCGCGACAGTGGAGAAAGTCTATCTTTTCCGGGGCGTCTCAAAAGAAATTCTCTTGTCCTTGGTTGCAAAAATGAAGGCAGAATACATACCACCTAGAGAGGatgtaatcatgcataatgaAGCACCAGATGATGTTTACATCATAGTGTCTGGAGAAGTGGAGATCATTGATTCTGTAACAGAGAGAGTTTTAGGGACTTTACGTGCAAAGGATGTgtttggagaagttggagcGCTTCGCTGTAGACCTCAGAACTTTACCTACAGAACCAAGACTCTCACTCAGCTTTTAAATCTCAAAACCAATGCTCTTGTAGAAGCAATGcagatgaagaaagaagacaatGTACAAATACTCAAGAATTTCCTTCAGCATTACAAGCAGCTGAAGGATCTGAATATCAGAGATTTAATGGTGGAAAGTGGGGAAGAGGAGGACCCAAACATGGCTGTGAACTTGCTAACTGTGGCCTCAACGGGCAATGCTGCTTTTCTTGAAGAGCTTCTCAAGGCTGGTTTGGATCCTGATGTCGGAGACTCCAAAGAGAGAACCCCATTGCACATAGCAGCAGCAAATGGGCATGAACAGTGTGTAAAAGTTTTACTTAAGCATGCATGCAACATTCGTAAAAGAGACATGAATGGTAACACTGCATTATGGGACGCCATAGCCTCAAGGCATAACTCCATTTTCCGGATCCTTTACCAGCTTGCTGCCCTGTCTGATCCACAAACAGCTGGTGATCTCCTGTGTTTGGCagcagaaagaaatgatttgaAAGTTATGAGTGAGCTTTTAAAGCAAGGATTGAACATTGATTCCAAAAATCACCATGGTTTAACAGCAATCCAAATTGCCATGGCTAAAAGTCATGTGGACATGGTTGAGTTGCTTGTCATGAATGGTGCAAATTTTGTTGGCGTAGATACccatgatttttcttcttcaacctTGGATCAAATGCTGCAAAATCTCGAGCTTGGCCATCAAATTACAGTACATGAAACCATACCAGGTGAGGTTCAACCAAGGGGACATGGAGAGCAGGAACGCAGTTGGGAAAGATATAATGGACCAAACTGTGCAAGAGTAAGCATATATAGAGGCCATCCTATAGTGAGCAGAGAAAAAGGATGCATGGAAGCTGGGAAACTGATAAGGTTACCTAATTCACTAGAGGAACTCAAGAGTATTGCAgGTGAAAAGCTTGGGTTTGATACAGAAGATGCAATGGTGACAGATGAAGAAGGAGCAGAAATAGACTCCATTGATGTGATCAGAGATAATGATAAACTTTTCATTGtcgaaaacataaaata 2501 0.407 MERNYSSHNLHFSSGLRKSYRKQQHGHSGDQPHLDQNDSMSSSSFNLHNVSKLILPPLGVSSSNQNQVDPKGWIISPMDSRYRCWESFMVILVAYTAWVYPFEVAFLNTTTNTKLYIVDNIVDLFFAVDIFLTFFVAYIDRRTQLLVRDSKKIAVRYLSTWFVMDVASTIPYEAVGYLLTGKHRIGLVYYLLGTLRFWRLRRVKQYFTRLEKDIRFSYFWVRCARLLSVTLFSVHCAGCLYYLLADRYPHQGKTWIGAVMPNFRETSLKIRYISAMYWSITTMSTVGYGDLHAVNTVEMIFIIFYMFFNLGLTAYLIGNMTNLVVEGTRRTMEFRDSIEAASNFVGRNQLPSRLKEQILAYMCLRFKAESLNQNHLIEQLPKSICKSIGQYLFFATVEKVYLFRGVSKEILLSLVAKMKAEYIPPREDVIMHNEAPDDVYIIVSGEVEIIDSVTERVLGTLRAKDVFGEVGALRCRPQNFTYRTKTLTQLLNLKTNALVEAMQMKKEDNVQILKNFLQHYKQLKDLNIRDLMVESGEEEDPNMAVNLLTVASTGNAAFLEELLKAGLDPDVGDSKERTPLHIAAANGHEQCVKVLLKHACNIRKRDMNGNTALWDAIASRHNSIFRILYQLAALSDPQTAGDLLCLAAERNDLKVMSELLKQGLNIDSKNHHGLTAIQIAMAKSHVDMVELLVMNGANFVGVDTHDFSSSTLDQMLQNLELGHQITVHETIPGEVQPRGHGEQERSWERYNGPNCARVSIYRGHPIVSREKGCMEAGKLIRLPNSLEELKSIAGEKLGFDTEDAMVTDEEGAEIDSIDVIRDNDKLFIVENIK 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00768 833 Pfam Ankyrin repeats (many copies) 643 693 IPR002110 GO:0005515
Bva13g00768 833 Gene3D - 84 325 - -
Bva13g00768 833 PANTHER POTASSIUM CHANNEL AKT2/3-LIKE 33 832 - -
Bva13g00768 833 SUPERFAMILY Voltage-gated potassium channels 77 325 - -
Bva13g00768 833 ProSiteProfiles Ankyrin repeat region circular profile. 575 606 - -
Bva13g00768 833 Pfam Ankyrin repeats (3 copies) 551 630 IPR002110 GO:0005515
Bva13g00768 833 SUPERFAMILY Ankyrin repeat 498 705 IPR036770 -
Bva13g00768 833 PRINTS EAG/ELK/ERG potassium channel family signature 316 325 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva13g00768 833 PRINTS EAG/ELK/ERG potassium channel family signature 95 102 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva13g00768 833 PRINTS EAG/ELK/ERG potassium channel family signature 119 129 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva13g00768 833 PRINTS EAG/ELK/ERG potassium channel family signature 130 139 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva13g00768 833 PRINTS EAG/ELK/ERG potassium channel family signature 272 289 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva13g00768 833 PRINTS EAG/ELK/ERG potassium channel family signature 298 309 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva13g00768 833 SMART ANK_2a 639 668 IPR002110 GO:0005515
Bva13g00768 833 SMART ANK_2a 608 638 IPR002110 GO:0005515
Bva13g00768 833 SMART ANK_2a 542 571 IPR002110 GO:0005515
Bva13g00768 833 SMART ANK_2a 575 604 IPR002110 GO:0005515
Bva13g00768 833 SMART ANK_2a 672 701 IPR002110 GO:0005515
Bva13g00768 833 SMART ANK_2a 493 528 IPR002110 GO:0005515
Bva13g00768 833 SMART cnmp_10 402 517 IPR000595 -
Bva13g00768 833 ProSiteProfiles Ankyrin repeat profile. 672 704 IPR002110 GO:0005515
Bva13g00768 833 CDD CAP_ED 402 503 IPR000595 -
Bva13g00768 833 ProSiteProfiles Ankyrin repeat profile. 575 607 IPR002110 GO:0005515
Bva13g00768 833 Pfam Ion transport protein 83 331 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bva13g00768 833 ProSiteProfiles Ankyrin repeat region circular profile. 672 698 - -
Bva13g00768 833 Pfam KHA, dimerisation domain of potassium ion channel 757 828 IPR021789 -
Bva13g00768 833 PANTHER POTASSIUM CHANNEL AKT1 33 832 IPR045319 GO:0005249|GO:0006813
Bva13g00768 833 Gene3D Jelly Rolls 369 542 IPR014710 -
Bva13g00768 833 SUPERFAMILY cAMP-binding domain-like 329 518 IPR018490 -
Bva13g00768 833 ProSiteProfiles KHA domain profile. 757 833 IPR021789 -
Bva13g00768 833 Pfam Cyclic nucleotide-binding domain 423 503 IPR000595 -
Bva13g00768 833 ProSiteProfiles cAMP/cGMP binding motif profile. 402 519 IPR000595 -
Bva13g00768 833 MobiDBLite consensus disorder prediction 21 42 - -
Bva13g00768 833 Gene3D - 543 718 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00768 Bva-Chr13 3600067 3605045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00768 1 580 Ion Channels AT4G22200 70.990 0.0 850
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00768 K21867 - gmx:100798422 1287.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00768 13 3600067 3605045 Bva13g00768 13 3600067 3605045 ECH