Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00764 ATGGAGGCTCCTCCCGATGACGATTGCTGCCCTGTCTGCCGCGGCGAATTCAAACATCCATGCCGCACCTCCTGCTCTCACTGGTTCTGCGGAGAGTGTATAATAAGCGTGTGGCTACACAGAGACGCCATGAAGCAATGCAAATGCCCAATTTGTTGCTGTCATTTTTCCAGCCTGGTACCATTTCAAGCCACATTTGACTACAATCAGGAACCTGAAGctcaaaaaattatggaaaatgTGAGAAGGTACAATAGGTTGCATGTGGGGGGAGTGCAAGGACTCTTTCAGAAACTGTATGATTTCCCATTTCTTGCTCGGATGGCTCTACAAGATATGATGGATCCTGATAAAACAAGCGCCTACTTGTATAAAGTGCGCATTTTTGCAATGCTTCTTGGCTTGATTTACATGCTGATCCCATTGGACATCATCCCATATGATAAACGAAAGATATTAAGATTGTTTGACCACTCTGCGGTTGCGTTTGTAACTATCATGCATATCATTGGACTCTTTCGTTCAAGACGATTGTTTAGGCGATA 545 0.433 MEAPPDDDCCPVCRGEFKHPCRTSCSHWFCGECIISVWLHRDAMKQCKCPICCCHFSSLVPFQATFDYNQEPEAQKIMENVRRYNRLHVGGVQGLFQKLYDFPFLARMALQDMMDPDKTSAYLYKVRIFAMLLGLIYMLIPLDIIPYDKRKILRLFDHSAVAFVTIMHIIGLFRSRRLFRR 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00764 181 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Bva13g00764 181 Pfam RING-type zinc-finger 10 50 IPR027370 -
Bva13g00764 181 SUPERFAMILY RING/U-box 2 59 - -
Bva13g00764 181 SMART ring_2 10 52 IPR001841 -
Bva13g00764 181 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 89 IPR013083 -
Bva13g00764 181 ProSiteProfiles Zinc finger RING-type profile. 10 52 IPR001841 -
Bva13g00764 181 PANTHER UNCHARACTERIZED 3 179 IPR038896 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00764 Bva-Chr13 3576134 3578225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00764 2 131 C3H Transcription Factor Family AT4G33940 44.615 6.82e-42 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00764 K15707 K24166 thj:104807351 195.282