Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00756 ATGGATTATAATTCTGGTGACCTTCCCCAAAATCCTCCGCAAAAGGATGTCGAAGATCCTAAAGACTTGGTTTTCTTGCATGGTGACTTGGATTTATGGATAATAGAAGCAAAATGTCTTCCAAATTTGGATGTGTCTACCGAAGCAATGAGAAAATGCTTCACAATGGGAAACAGTTGCTCGCCTCCCTTTATGAAAGGACTTAAGAAACACCCCGGGAATACTAGTGATCCTTATGTCTCTGTCTGCCTAGCAGGAGCTACTGTAGctcaaactaaaataattccTAACACTGAGAACCCTTCGTGGGATGAGCATTTTGTAGTTCCGGTCGCTCACCCTGTTACCAAAATCGAGTTTCATGTGAAAGACAATGATATTCTTGGGGCTGAACTCATTGGAGTAGTGGAGGTGTCCGTTCAGAAGATTCAGTCAGGAGATGTTAATGAGTGGTTTCCTATCTCTAGTCAGTATGCAAACTTCCTAAAACTTAATCCCGAgttgcatatttttattcagtttAGGCCAGTTTCAACGAACCCTCTATACAATAGTGCTGGAGATAATGTAGGAGTTATGGATTCATATTTTCCTCTCCGGAAAGGAGGGAATGTGACTCTTTATCAAGATGCACATGTACCAGATGCTATGCTACCTGAAATTCCACTCGAGGGTGGGAACGTTTTTCAGCAGGGTAAATGTTGGGAGGACATATGCCATGCGATTTTGGAAGCTACCCacctaatatatatcattggATGGTCAATCTACCACCCTGTAAAGCTTGTCAGAGAACCAACAAAACCCTTACCTTCTGGTGGAGAGCTTTCACTTGGAGAGTTGTTGAAGTTCAAGTCACAAGAAGGGGTCCGAGTGGTTATGCTGATTTGGGATGATAAAACTTCACATGACAAATTATTCTTGAAAACGGAAGGCGTCATGCAGACCCACGACgaagaaactaaaaaatttttcAAACACTCCACTGTTCACTGCGTGCTGGCTCCACGTTATCCCAGCAGTAAGCTCAGTATATTCAAGCAACAGGTTGTGGGAACCCTATTTACACATCATCAAAAGTCCGTGGTTCTTGACACTCAATCTTTTAGGAATTATAGGAAAATAACTGCTTTTATTGGTGGTCTGGATCTATGTGATGGAAGATACGATACTCCTCAGCATCGGCTCTTTGATGATCTAGATACTATCTTTGAAGATGATTTTCATAACCCTACATTTTCATCAAATTCCCGTGGACCAAGGCAACCGTGGCATGACTTACACTGTAAAGTTGAGGGTCCAGCTGCATATGATATACTGACCAATTTTGAACAAAGATGGAGGAAAGCCAGAAAATGGCGTGACTTTAGGCTTAAAAGGGTAACAAATTGGTATGATGATGCTTTGCTGAATCTAGACCGTGTTTCATGTATCCTCACTCCAAATTCTTGTCCTGATGGTGATAAAATTGTTCATGTAACCGATGAAGATGATCCTGAGGAATGGCATGTCCAGGTATTTCGGTCCATAGACTCAGGATCTGTGAATGGTTTTCCGAAGGATGCCGATGAAGCTAAAGCTAAGCATCTTTCCTGtgcaaaaaatttgaaaatagatCAAAGCATCCATGCTGCTTACGTAAAAGCAATAAGATCAGCTCaacactttatatatatagagaatcAGTATTTTCTGGGATCTTCCTATAATTGGCCTTCATACAAACATGCAGGTGCAGATCACTTAATTCCCATGGAGTTGGCGCTGAAAATTGTCAGCAAGATTAGATCAAATGAGCGTTTTTCCGTGTATATAGTTATACCAATGTGGCCAGAGGGGATTCCAACCAGTTCTGCTGTGCAGGAAATCTTGTTCTGGCAGGGACAGACGATGTCTATGATGTACAGAATTGTTGCAGATGCCATTAAGGAGGCAGGTCTATCTGATCTTTATCGTCCACAAGATTATCTGAACTTCTACTGCCTTGGAAAGCGCGAACACGGAGATTTAGAAATTTCACAAACACACTCTCATTCATCTGAAAACCGTGCTCTGGCCTCAGCTAAAAACAGGCgttttatgatttatgttcATGCCAAAGGGATGGTGGTTGATGATGAATATGTAATTGTGGGATCTGCAAATATTAATCAGAGATCCTTGGATGGCTCGAGGGACACAGAAATTGCCATGGGTGCTTATCAGTCAGGTTACACATGGCCAGCAAAGAATTCTCATCCACGTGGCCAGGTGTATGGTTACAGAATGTCACTATGGGCTGAGCATCTTAGTTATATTGAGGACAGTTTCAGTGATCCGAAGAGCCTTGAATGCATGAGACTTGTGAACCGAATTGCAAGAGATAACTGGGATGCATATGTATCTGAGGAAGGGCAACAGCAGATGAAGGGACACTTGATGCAGTATCCAGTTTATGTGAATAGAGATGGGAAAGTGACTGCATTGCATGATCATGAGTGCTTTCCTGATGTTGGTGGTAAAGTTCTTGGATCACACAACTCTCTCCCAGATGCACTTactactta 2546 0.4046 MDYNSGDLPQNPPQKDVEDPKDLVFLHGDLDLWIIEAKCLPNLDVSTEAMRKCFTMGNSCSPPFMKGLKKHPGNTSDPYVSVCLAGATVAQTKIIPNTENPSWDEHFVVPVAHPVTKIEFHVKDNDILGAELIGVVEVSVQKIQSGDVNEWFPISSQYANFLKLNPELHIFIQFRPVSTNPLYNSAGDNVGVMDSYFPLRKGGNVTLYQDAHVPDAMLPEIPLEGGNVFQQGKCWEDICHAILEATHLIYIIGWSIYHPVKLVREPTKPLPSGGELSLGELLKFKSQEGVRVVMLIWDDKTSHDKLFLKTEGVMQTHDEETKKFFKHSTVHCVLAPRYPSSKLSIFKQQVVGTLFTHHQKSVVLDTQSFRNYRKITAFIGGLDLCDGRYDTPQHRLFDDLDTIFEDDFHNPTFSSNSRGPRQPWHDLHCKVEGPAAYDILTNFEQRWRKARKWRDFRLKRVTNWYDDALLNLDRVSCILTPNSCPDGDKIVHVTDEDDPEEWHVQVFRSIDSGSVNGFPKDADEAKAKHLSCAKNLKIDQSIHAAYVKAIRSAQHFIYIENQYFLGSSYNWPSYKHAGADHLIPMELALKIVSKIRSNERFSVYIVIPMWPEGIPTSSAVQEILFWQGQTMSMMYRIVADAIKEAGLSDLYRPQDYLNFYCLGKREHGDLEISQTHSHSSENRALASAKNRRFMIYVHAKGMVVDDEYVIVGSANINQRSLDGSRDTEIAMGAYQSGYTWPAKNSHPRGQVYGYRMSLWAEHLSYIEDSFSDPKSLECMRLVNRIARDNWDAYVSEEGQQQMKGHLMQYPVYVNRDGKVTALHDHECFPDVGGKVLGSHNSLPDALTT 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00756 848 Gene3D C2 domain 23 173 IPR035892 -
Bva13g00756 848 ProSiteProfiles C2 domain profile. 9 152 IPR000008 -
Bva13g00756 848 PANTHER PHOSPHOLIPASE D 21 848 IPR015679 -
Bva13g00756 848 SMART pld_4 693 720 IPR001736 GO:0003824
Bva13g00756 848 SMART pld_4 353 388 IPR001736 GO:0003824
Bva13g00756 848 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 26 177 IPR035892 -
Bva13g00756 848 SUPERFAMILY Phospholipase D/nuclease 540 778 - -
Bva13g00756 848 Gene3D Endonuclease Chain A 495 736 - -
Bva13g00756 848 PIRSF PLD_plant 16 848 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bva13g00756 848 Gene3D Endonuclease Chain A 226 467 - -
Bva13g00756 848 CDD C2_plant_PLD 24 175 - -
Bva13g00756 848 Pfam PLD-like domain 548 729 IPR025202 -
Bva13g00756 848 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 353 388 IPR001736 GO:0003824
Bva13g00756 848 Pfam Phospholipase D Active site motif 354 388 IPR001736 GO:0003824
Bva13g00756 848 SMART C2_3c 29 152 IPR000008 -
Bva13g00756 848 Pfam C2 domain 28 154 IPR000008 -
Bva13g00756 848 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 693 720 IPR001736 GO:0003824
Bva13g00756 848 SUPERFAMILY Phospholipase D/nuclease 194 456 - -
Bva13g00756 848 Pfam Phospholipase D C terminal 767 838 IPR024632 -
Bva13g00756 848 PANTHER PHOSPHOLIPASE D 21 848 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00756 Bva-Chr13 3539484 3544902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00756 23 847 Phospholipase D Gene Family (Wang group) AT2G42010 52.852 0.0 898
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00756 K01115 - gmx:100810824 1315.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00756 13 3539484 3544902 Bva13g00756 13 3539484 3544902 ECH