Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00749 ATGTCTGCCCGTGTCGTCTGCAACACCACCCTGCCCCGGCTCACCAAGCCAGTGGTGGAGTACAAGCAGTGCCAGCGCAATCACGCCGCCTCCCTCGGCCTCGTCAGCGTCGACGGCTGCCAGGAATTCATCCAGCTCGGCGGGGAGGGATCCACAGCGGCCATGATCTGCGCTGCATGTAACTGCCACCGCAATTTTCACAAGCGGGAGGTTCGGAACTTGCCAGTGTCCAGTCCCAATCCTGTCAATGCCGTTGCACCTGCACCTGCGCCCGCAGCTGCGCGTGCTCCGCCGGTTAGACCTTCTGTCCCCAGCACGAACAACAATGGCGGTCCTGAGACGGTGGCGGCGGAGATGAGGCATAGGAAGACGAGGATCAGATTCACGCCGGAGCAGAAGGCCCAGCTGATGAACTTCGCGGTGAGAATAGGGTGGAGAACCCGGCACACTCCGGAAACCTTAATCGAGAATTTCTGCAGGGAAATGGGGATCACCCGCAGGGTGTTAAGAGATTGGCTGAGCAACAACCGCCACCTCAGGCACACCACCTCCGCCGTGGCCGCCGACGGAGCTGGCACCGCCTG 584 0.6182 MICAACNCHRNFHKREVRNLPVSSPNPVNAVAPAPAPAAARAPPVRPSVPSTNNNGGPETVAAEMRHRKTRIRFTPEQKAQLMNFAVRIGWRTRHTPETLIENFCREMGITRRVLRDWLSNNRHLRHTTSAVAADGAGTA 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00749 140 SUPERFAMILY Homeodomain-like 54 124 IPR009057 -
Bva13g00749 140 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 3 127 - -
Bva13g00749 140 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 68 123 IPR006455 -
Bva13g00749 140 MobiDBLite consensus disorder prediction 32 60 - -
Bva13g00749 140 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 9 3 127 - -
Bva13g00749 140 Gene3D - 52 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00749 Bva-Chr13 3508529 3508951 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00749 3 124 ZF-HD Transcription Factor Family AT1G69600 33.793 7.38e-21 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Bva13g00749 ZF-HD_dimer 5.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00749 - - egr:104417993 89.3521