Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00747 ATGTCTGACACTTTCGCCTTTCAGCAGCATGCAGATGCAGACGTAACCTACCTGGAATGCAAGCGCAATCACGCCGCCGCCCTTGGCTTCACCACCGTAGACGGCTGCCAAGAGTTTTTGCCAGCTGGCGGTGACGGCACCAGGGACGCCGTGATCTGTGATGCATGTGGTTGCCACAGAAACTTCCACCGGAGGGTGAAGGTGTGCAACAATGGTACTACCATACCCATATCCCCCGACACTCCAATTATTGCACTTTCACCAACTCCTCCGCCGCCAATTGGCTCCCCCGTCCGTATGATGAACTACGGCAGAAACAACATCGGTGCATTTGCGCAGGCAGCGCCGCCGCAACCTAATAGTAGAGGGACCAGGATCGGGACCGTGCCCCAGACAAGGAGAGTCTTCACGGTGGAGCAGAAGGCCCAGTTGATGAGTTTCGCGAGGAAGGTGGAGTGGCAAATCCGGAATGCTACTGACGAGGACGTGAACAGCATCTGCAACGACTTGGGGATCACCCGGCAAGTACTCCGGGGTTGGCTGAACAACAATCGCCGCCGGTTGATGACAAGTTG 575 0.5652 MSDTFAFQQHADADVTYLECKRNHAAALGFTTVDGCQEFLPAGGDGTRDAVICDACGCHRNFHRRVKVCNNGTTIPISPDTPIIALSPTPPPPIGSPVRMMNYGRNNIGAFAQAAPPQPNSRGTRIGTVPQTRRVFTVEQKAQLMSFARKVEWQIRNATDEDVNSICNDLGITRQVLRGWLNNNRRRLMTS 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00747 191 Pfam ZF-HD protein dimerisation region 15 67 IPR006456 -
Bva13g00747 191 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 16 65 IPR006456 -
Bva13g00747 191 SUPERFAMILY Homeodomain-like 127 187 IPR009057 -
Bva13g00747 191 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 133 185 IPR006455 -
Bva13g00747 191 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 17 66 IPR006456 -
Bva13g00747 191 Gene3D - 116 191 - -
Bva13g00747 191 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 5 11 186 - -
Bva13g00747 191 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 11 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00747 Bva-Chr13 3506924 3507499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00747 13 188 ZF-HD Transcription Factor Family AT4G24660 37.079 3.02e-34 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Bva13g00747 ZF-HD_dimer 2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00747 - - rcn:112171728 120.168