Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00727 ATGTCATTTATGGCGTCTGCTAGCCTTGGGAATGGCGGGGCCGGTAGTTCTAGGTCTGCTAATGGCTTCAGGGGTTCATCTAGTTCAGTGGATTGGCTTGGTAGAGAGATGCTTGAGATGCGATTGAGGGACAAAGTAGACCATGATGAGGACAGAGACAGTGAGCCTGACATAATCGATGGGGTGGGTGCTGAAACAGGACATGTGATAAGAACCAGCATTGGTGGACGAAATGGTCAATCCAAGCAGAATGTCAGTTATATTGCAGAGCATGTGGTTGGAACAGGCTCTTTTGGTGTTGTTTTTCAAGCAAAATGTAGAGAAACTGGAGAGATTGTAGCCATCAAGAAGGTTCTCCAGGACAAGCGCTACAAGAATAGGGAGTTACAGATTATGCAAATGCTGGATCATCCAAATATCGTAGCCCTCAAgcattgtttcttttcaacaaCCGACAAAGAAGAGCTTTACCTGAATCTCGTACTTGAATATGTTCCTGAAACTGTAAACCGTATTGCAAGGAACTATAGCAGGATTAACCAGCGAATGCCTTTGATATATGTTAAACTTTACACCTACCAGATTTGCAGGGCCCTTGCTTATATACATAATTGTATTGGTATATGTCACCGTGACATTAAACCTCAGAACCTACTAGTAAACCCACATACGCATCAGCTGAAACTTTGTGATTTTGGGAGTGCTAAAGTGTTGGTCAAAGGAGAACCAAATGTTTCTTACATCTGTTCAAGATATTATCGTGCTCCAGAACTTATATTTGGTGCAACTGAGTACACAACTGCTATAGATATTTGGTCTACTGGCTGTGTAATGGCTGAGTTACTTCTTGGACAGCCTTTGTTTCCTGGAGAAAGTGGAGTTGATCAACTAGTTGAGATAATCAAGGTTTTGGGAACTCCAACAAGGGAGGAGATAAAATGCATGAACCCAAATTATACTGAATTTAAATTTCCACAGATAAAACCTCATCCATGGCACAAGGTCTTTCAGAAACGTTTACCCCCAGAAGCAGTGGACCTTGTCTGTAGGTTCTTTCAGTACTCCCCCAACCTGCGATGTACTGCTCTGGAAGCTTGCATACATCCCTTCTTCGATGAATTGAGAGACCCAAATACACGCCTCCCAAATGGCCGCCCACTTCCTCCACTTGTTAACTTCAAATCTCAGGAGCTCTCGGGTATACCACCTGACATCATCAATCGACTTATTCCAGAGCATGCCCGCTGTAAATTGTTCGGTGCATCTGAGACAGAGAATGCCAATCCCGCAGAAAGAGCTCATAGGATGATAATATG 1316 0.4286 MSFMASASLGNGGAGSSRSANGFRGSSSSVDWLGREMLEMRLRDKVDHDEDRDSEPDIIDGVGAETGHVIRTSIGGRNGQSKQNVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRINQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACIHPFFDELRDPNTRLPNGRPLPPLVNFKSQELSGIPPDIINRLIPEHARCKLFGASETENANPAERAHRMII 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00727 438 ProSiteProfiles Protein kinase domain profile. 87 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00727 438 Gene3D Transferase(Phosphotransferase) domain 1 167 415 - -
Bva13g00727 438 MobiDBLite consensus disorder prediction 1 27 - -
Bva13g00727 438 Gene3D Phosphorylase Kinase; domain 1 72 166 - -
Bva13g00727 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Bva13g00727 438 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 4 417 - -
Bva13g00727 438 SUPERFAMILY Protein kinase-like (PK-like) 86 398 IPR011009 -
Bva13g00727 438 ProSitePatterns Protein kinases ATP-binding region signature. 93 117 IPR017441 GO:0005524
Bva13g00727 438 SMART serkin_6 87 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00727 438 CDD STKc_GSK3 82 374 IPR039192 -
Bva13g00727 438 PANTHER SHAGGY-RELATED PROTEIN KINASE DELTA-RELATED 4 417 - -
Bva13g00727 438 Pfam Protein kinase domain 89 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00727 Bva-Chr13 3390051 3395086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00727 93 374 Core Cell Cycle Gene Families AT1G76540 35.517 4.87e-57 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Bva13g00727 Pkinase 1.2e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00727 K03083 - jre:108983720 803.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00727 13 3390051 3395086 Bva13g00727 13 3390051 3395086 ECH