Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00719 ATGGGCTGTATATGCTCAAAAGGAACCTCTTCAAATCAATATGTTGCTGAGAACCATGTAAGAGACAAAGATTTAAGGGCAAACAGATCTTCAAGACATTCGGGTCCTTCTAGGGGAGAGAGAATTGCAGTGGAAGCTGATGACAACGGGAATGATGCTACTGCAAGGTTGATATCTGATCCATCTAGGGATGGGCATGCAGGGTCCACTCCCAATTCGCCAGATGAGAGGGAAAAGAATGTGGAAATTACTGGAGTGTCTTCAAAACCACAGGTTGAGATGAACTCAAACATGGGAATTGGGGTTGGAGGGCAAGGACAACCAAGGTTGTCTAGAATCTATGGAGGGGAAAGAGGAGCTCAAGTTCTTGCTGGTTGGCCTTCTTGGCTCACTGCTGTTGCTGGGGAAGCCATTAGTGGTTGGATACCACGTAGAGCAGACTCATTTGAGAAGTTGGAGAAGATTGGGCAAGGAACTTACAGCAGCGTTTACAGAGCTCGTGATcttgaatcaaataaaatagttgCATTGAAGAAGGTTCGGTTTGCTAACATGGATCCAGAAAGTGTTCGTTTTATGGCAAGAGAAATAATTGTTCTGCGAAGACTTGATCATCCAAATGTCATGGAGCTTGAAGGCATGATTACTTCAAGGGTTTCTGGCAgcttatatcttatttttgaatatatggAACATGATCTTGCAGGGCTTGCAGCAATATCTGGCAGCAAGTTCACTGAAACCCAGATCAAATGTTATATGCAACAGTTGCTTCGTGGTCTTGAGCATTGTCACAGTCATGGTGTTCTGCACCGTGACATCAAGGGCTCAAATCTTCTGGTTAGCAACAATGGCAACCTAAAGATTGGTGATTTTGGGCTAGCAACTTTTTTTCAATCATCTCAAAATCAGAGGCAGCCTTTAACAAGTCGTGTGGTAACCTTGTGGTACAGACCACTTGAACTTCTACTTGGAGCTACAGATTATGGAGTTGCTGTGGACTTGTGGAGTAGTGGCTGCATTCTTGCAGAATTGTTTGCTGGCAAGCCCATAATGCCTGGACGAACAGAGGTAGAGCAACTTCATAAGATCTTCAAGCTTTGTGGATCGCCTTCTGAAGAATATTGGAGGAAGTCAAAGCTACCACATGCAACAATATTCAAACCTTATCATCCTTACAAACGTGTTGTTTCTGAGACATTTAATGATTTTCCTTCGTCAGCACTGAGCCTTTTGGAGTCTCTCCTTGCTGTAGAACCCGAGGATCGAGGAACTGCTTCTTTAGCACTTCAGAGTGAGttCTTCACAACGAAGCCTCTTCCTTGTGATCCATCAAGTTTACCGAAGTACCCACCAAGTAAGGAGTTTGATGCCAAGCTTCGAGAAGACGAAGCTAGAAGGCGACGAGCTGCTGGTGGTAAAGGGCATCAACAGGAATTAGTTAGGAGGGCTACCAGAGAATCTAAAGCGGTGCCAGCACCTGGTGCTAATGCTGAGTTGCAGATATCAATAGAGAAGAGAAAACTGCAGCCTAATTCTGTAAGTGAGAAGTTCATTACAGAAGAGGATGGTGGTGCTGGCTTTCCAATTGAACCTGCAAGGTCAGGACCCCTCAATGTTTTCTCTCATTCTGGTCAGTCAATGCATCCAACTGCATATGGGTCTTCGCGCAACATGGCTGAGGAAGAGGCCCTCGCTGTCCCTGGCCATATCCTTAGCTCAAGAAACACAGCCGAGTTGAGAAAGCAGGGATCTTTCTCGCATGTTGGCGCTGGTCATGCAACAAAACTGTCTAGATTTTCTAATTCAGTTGCAGTTCGAGGTGGTGGTTCGCGGTTTGATATTGGTAGAGACTCTAGTGGGAGTTCAAATTTGCTAGAAGATCGCTTTAGGACAAGATATAGTCATCTAGCTGATGAGTCCAACCACTTGCTGGATAGGTCTTCATACAAGGAGTGCCATCCTACAGTGAAGGAGCCTACCATGGGTTCCTTGCCTAAAAATGGACCCATCCACTATTCAGGACCATTGCTCCCTTCAGGAGGAAACCTTGAAGAAATGCTCAAGGAACACGAGAGACAAATCCAACATGCTGTCCGCAAAGCTCGTATCGAAAATGTCAAGACAAAAGAAACTGACAGTGAGAATGGCCAAACCGAATCACTACTTCACCATGGCAGAAATAACAACTG 2192 0.4443 MGCICSKGTSSNQYVAENHVRDKDLRANRSSRHSGPSRGERIAVEADDNGNDATARLISDPSRDGHAGSTPNSPDEREKNVEITGVSSKPQVEMNSNMGIGVGGQGQPRLSRIYGGERGAQVLAGWPSWLTAVAGEAISGWIPRRADSFEKLEKIGQGTYSSVYRARDLESNKIVALKKVRFANMDPESVRFMAREIIVLRRLDHPNVMELEGMITSRVSGSLYLIFEYMEHDLAGLAAISGSKFTETQIKCYMQQLLRGLEHCHSHGVLHRDIKGSNLLVSNNGNLKIGDFGLATFFQSSQNQRQPLTSRVVTLWYRPLELLLGATDYGVAVDLWSSGCILAELFAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWRKSKLPHATIFKPYHPYKRVVSETFNDFPSSALSLLESLLAVEPEDRGTASLALQSEFFTTKPLPCDPSSLPKYPPSKEFDAKLREDEARRRRAAGGKGHQQELVRRATRESKAVPAPGANAELQISIEKRKLQPNSVSEKFITEEDGGAGFPIEPARSGPLNVFSHSGQSMHPTAYGSSRNMAEEEALAVPGHILSSRNTAELRKQGSFSHVGAGHATKLSRFSNSVAVRGGGSRFDIGRDSSGSSNLLEDRFRTRYSHLADESNHLLDRSSYKECHPTVKEPTMGSLPKNGPIHYSGPLLPSGGNLEEMLKEHERQIQHAVRKARIENVKTKETDSENGQTESLLHHGRNNN 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00719 730 Coils Coil 681 701 - -
Bva13g00719 730 ProSiteProfiles Protein kinase domain profile. 149 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00719 730 MobiDBLite consensus disorder prediction 463 493 - -
Bva13g00719 730 MobiDBLite consensus disorder prediction 1 105 - -
Bva13g00719 730 PANTHER KINASE CDK9, PUTATIVE-RELATED 96 706 - -
Bva13g00719 730 SUPERFAMILY Protein kinase-like (PK-like) 143 443 IPR011009 -
Bva13g00719 730 PANTHER CELL DIVISION PROTEIN KINASE 96 706 - -
Bva13g00719 730 MobiDBLite consensus disorder prediction 463 486 - -
Bva13g00719 730 Gene3D Transferase(Phosphotransferase) domain 1 232 474 - -
Bva13g00719 730 MobiDBLite consensus disorder prediction 705 720 - -
Bva13g00719 730 MobiDBLite consensus disorder prediction 17 47 - -
Bva13g00719 730 ProSitePatterns Serine/Threonine protein kinases active-site signature. 269 281 IPR008271 GO:0004672|GO:0006468
Bva13g00719 730 Gene3D Phosphorylase Kinase; domain 1 136 231 - -
Bva13g00719 730 Pfam Protein kinase domain 149 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00719 730 ProSitePatterns Protein kinases ATP-binding region signature. 155 178 IPR017441 GO:0005524
Bva13g00719 730 SMART serkin_6 149 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00719 730 MobiDBLite consensus disorder prediction 1 16 - -
Bva13g00719 730 CDD STKc_CDK9_like 149 435 - -
Bva13g00719 730 MobiDBLite consensus disorder prediction 705 730 - -
Bva13g00719 730 MobiDBLite consensus disorder prediction 84 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00719 Bva-Chr13 3354460 3359871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00719 141 492 Core Cell Cycle Gene Families AT5G10270 49.319 1.24e-113 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Bva13g00719 Pkinase 1.4e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00719 - - dzi:111281982 917.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00719 13 3354460 3359871 Bva13g00719 13 3354460 3359871 ECH