Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bva13g00716 | ATGGGAAGGAAGAAGACAGAGGAGGGTAAGACAAGCGGCAAGGATAATCCTAAGAAGGAGAAATTTTCAGTCTCTGCTATGCTTGAAAGTATGGATGCAAAGCctgaaaaacccaaaaaagcaTCTTCTTCGTCCACTAAGGCTAAGGCGAAATCAGCCCCGAAATCTTCTGGTTACACTGATGGTATTGACCTTCCTCCatctgatgatgaagaagatgaagctcTCTTGGAAGAGGAGGAGCACAAAAGTAATGTGCAGAGACGTTCCAGCCAGCAACAGAGGCCTGACTTGAAGCCACTAGAGGTATCTGTTACAGATAAGGAGTTAAAGAAGcgtgaaaagaaagaacttttAGCTGCCCATGTGGTAGAACAGGCAAAGAAGGAAGCACTTAAGGATGACCATGATGCGTTCACTGTGGTTATTGGGAGCAAGACTTCAGTGCTTGATGGAGAAGATGGAGCTGATGCTAACGTTAAAGATATAACAATAGATAATTTCTCCGTGTCTGCTCGAGGAAAAGAGCTTCTGAAGAATGCATCTGTGAAGATATCTCACGGGAAGAGATATGGTTTGGTTGGGCCTAATGGAAAGGGTAAGTCCACGTTGCTGAAGCTTCTTGCTTGGAGGAAGATACCAGTTCCAAAAAACATTGATGTGCTATTGGTTGAACAGGAGGTTGTTGGCGATGATAAATCTGCAGTTGAAGCAGTTGTTTCAGCTAATGTAGAACTAGTGAAAACCCGACAAGAAGTTGCTTCCTTACAGAATGCAGCTTCTGCTGCAGAAAACAATGATGATGAGGAGGATGATGCAGGAGAGAGGCTCAATGAATTGTTTGATAAGTTGCAGTTGTTGGGGAATGATACAGCTGAAGCACAGGCATCAAAAATTCTTGCTGGTTTGGGCTTTACTAAGGATATGCAGGGCCGTCCTACAAAATCATTTAGTGGTGGCTGGAGGATGAGAATTTCTTTAGCTAGAGCACTTTTCGTGCAGCCAACTCTGTTGCTGCTTGATGAACCTACAAATCATCTTGACCTTAGAGCTGTTCTCTGGTTGGAGGAGTACTTGTGCCGTTGGAAGAAGACTTTGGTGGTTGTCTCACATGATAGGGATTTCCTCAACTCAGTTTGCACAGAGATCATTCATCTGCATGATTTGAAACTCCATTTTTACCGTGgaaattttgatgattttgaagGTGGTTATGAGCAGCGTCGCAAAGAGATGAataagaagtttgagattttTGAGAAACAAATGAGAGCAGCCAAAAGGAGCGGGAACCGGGAGAAGCAGGAAAAAGTGAAGGATCGAGCTAAGTTCGtagctgctaaggaagtgtcGAAGGGCAAGGGCAAGGGCAAGGTTGATGAAGATGACGCCCCATTAGAGGCCCCACAGAAGTGGAGGGACTACACTGTTGAGTTCCACTTTCCTGAACCTACTGAGCTTACACCTCCACTTCTGCAGCTTATTGAAGTTAGCTTCAGCTACCCCAACCGGGAGGACTTTAGACTCTCCAATGTTGATGTTGGTATTGATATGGGGACTCGTGTTGCCATTGTTGGGCCAAATGGAGCTGGTAAATCCACATTGCTGAATCTTCTTGCTGGTGATTTGGTTCCATCTGAGGGTGAAGTTCGAAGGAGTCAGAAGCTAAGGATTGGAAGATACTCCCAACACTTTGTGGACCTTTTAACCATGGATGAAACACCTGTTCAGTATCTTCTTCGTCTCCATCCAGACCAGGAGGGTCTTAGTAAGCAGGAGGCTGTCCGTGCAAAACTTGGAAAGTTTGGACTCCCTAGCCATAACCATCTTACCCCGATTGTCAAATTATCAGGAGGTCAGAAAGCTCGAGTGGTCTTCACTTCAATATCCATGTCAAAGCCTCACATTTTACTGTTGGATGAACCCACAAATCATCTGGATATGCAAAGTATTGATGCGCTGGCTGATGCACTAGATGAATTTACTGGTGGAGTTGTCCTTGTCAGCCACGATTCTAGATTAATATCACGTGTTTGTGATGATGAGGAGAGGAGTGAAATTTGGGTGGTTGATGATGGAACAGTGAGCAAATTCCCTGGAACATTTGAGGACTACAAGGAGGATTTGCTTAGAGAAATTAAAGCTGAAGTTGATGATTG | 2159 | 0.4233 | MGRKKTEEGKTSGKDNPKKEKFSVSAMLESMDAKPEKPKKASSSSTKAKAKSAPKSSGYTDGIDLPPSDDEEDEALLEEEEHKSNVQRRSSQQQRPDLKPLEVSVTDKELKKREKKELLAAHVVEQAKKEALKDDHDAFTVVIGSKTSVLDGEDGADANVKDITIDNFSVSARGKELLKNASVKISHGKRYGLVGPNGKGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDKSAVEAVVSANVELVKTRQEVASLQNAASAAENNDDEEDDAGERLNELFDKLQLLGNDTAEAQASKILAGLGFTKDMQGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNSVCTEIIHLHDLKLHFYRGNFDDFEGGYEQRRKEMNKKFEIFEKQMRAAKRSGNREKQEKVKDRAKFVAAKEVSKGKGKGKVDEDDAPLEAPQKWRDYTVEFHFPEPTELTPPLLQLIEVSFSYPNREDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPSEGEVRRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIVKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCDDEERSEIWVVDDGTVSKFPGTFEDYKEDLLREIKAEVDD | 719 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bva13g00716 | 719 | Pfam | ABC transporter | 509 | 644 | IPR003439 | GO:0005524 | |
| Bva13g00716 | 719 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 163 | 420 | IPR003439 | GO:0005524 | |
| Bva13g00716 | 719 | PANTHER | ATP-BINDING TRANSPORT PROTEIN-RELATED | 8 | 719 | - | - | |
| Bva13g00716 | 719 | MobiDBLite | consensus disorder prediction | 1 | 111 | - | - | |
| Bva13g00716 | 719 | Gene3D | - | 459 | 718 | IPR027417 | - | |
| Bva13g00716 | 719 | PANTHER | BNAA06G39310D PROTEIN | 8 | 719 | - | - | |
| Bva13g00716 | 719 | ProSitePatterns | ABC transporters family signature. | 317 | 331 | IPR017871 | GO:0005524 | |
| Bva13g00716 | 719 | Gene3D | - | 161 | 444 | IPR027417 | - | |
| Bva13g00716 | 719 | CDD | ABCF_EF-3 | 163 | 390 | - | - | |
| Bva13g00716 | 719 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 492 | 717 | IPR003439 | GO:0005524 | |
| Bva13g00716 | 719 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 163 | 397 | IPR027417 | - | |
| Bva13g00716 | 719 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 471 | 704 | IPR027417 | - | |
| Bva13g00716 | 719 | Coils | Coil | 409 | 429 | - | - | |
| Bva13g00716 | 719 | Coils | Coil | 239 | 266 | - | - | |
| Bva13g00716 | 719 | SMART | AAA_5 | 518 | 694 | IPR003593 | - | |
| Bva13g00716 | 719 | SMART | AAA_5 | 187 | 397 | IPR003593 | - | |
| Bva13g00716 | 719 | CDD | ABCF_EF-3 | 492 | 694 | - | - | |
| Bva13g00716 | 719 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
| Bva13g00716 | 719 | Coils | Coil | 706 | 719 | - | - | |
| Bva13g00716 | 719 | Pfam | ABC transporter | 178 | 345 | IPR003439 | GO:0005524 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bva13g00716 | Bva-Chr13 | 3341029 | 3344397 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bva13g00716 | 491 | 698 | Calmodulin-binding Proteins | AT2G36910 | 29.060 | 1.73e-14 | 75.9 |