Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00714 ATGAGAGACACTATGATTAGAAATTGCCAATGTTGGTTCCCTCGGCCGGGTGAATGGGTAAAGGGAAAATTGGTTGGATCAGGATCTTTTGGCACGGTCCATTTGGCAATGAACAAATCCACTGGAGGACTTTTTGTTGTGAAACAATCACATTCAGGCGCTGGACTTGAGGCTTTGGAGAATGAGTtcaaaattctcaagagtTTAAAATCATCCCCTTATATTGTCCAATGTTTGGGGACAGAAAAAGGTAAAGGCAATATCAGTGTTCTGATGGAGTATATGGCAGGAGGCAGTGTTGCAGATGTGGCACAAAAATTTGGTGGATCATTAGAAGAAGAGGTTGTTAGGCTCTACACTAGAGAAATCCTTAAAGGGTTAAAGGATCTTCACCAACATGGGATTGTGCATTGTGATCTCAAGTGCAAGAATGTGCTTTTGGGCTCATCTGGGGATATCAAATTGGCAGATTTTGGATGTGCAAAAGAGCTAAAGGACTTGAAGGGCAGTGGTGGTTTGGTGAAATCTTTGAAATCTATTGGTGGTACTCCTCTATGGATGGCTCCAGAagttttgagaaaagaaagtcTGGATTGTGCAGCAGATATATGGTCCTTGGGATGCACAGTTATTGAAATGGCTACTGGGAGGCCTCCCTGGGGTGGTGATGTTTCAAATCCAATGGCTGCTATTCTGAGGATTGCCCAGGGCAATGAGACACCTCAATTTCCAACCCATTTTTCGAACGAGGGTTTGGATTTCTTGAGCAAGTGCTTGGAGAGAGATTCAGCAAAGAGATGGACTGCTGAGGAGTTACTTAACCATCCATTTGTTTCGGGGAATTCAAGAAGAAATTCTCAGAAAAAACATGCTTGCTCACCTGCAAGCGTCTTAGAGGTTCAAGGATTTAATGCTGGTTATGATTCAGATGAACCAGAAAGTCTTGAGGAGAATGATTTCTCAACCAGAAACCCTTTAACATGGTGCCGTGTTGAAGGAAAAGCAACAGCTATGTGGCCGTGGGAAGACAGTGAATTTGGGTCATCAGGAAATTGGGTTACTGTTAGATCAGGCTG 1076 0.4219 MRDTMIRNCQCWFPRPGEWVKGKLVGSGSFGTVHLAMNKSTGGLFVVKQSHSGAGLEALENEFKILKSLKSSPYIVQCLGTEKGKGNISVLMEYMAGGSVADVAQKFGGSLEEEVVRLYTREILKGLKDLHQHGIVHCDLKCKNVLLGSSGDIKLADFGCAKELKDLKGSGGLVKSLKSIGGTPLWMAPEVLRKESLDCAADIWSLGCTVIEMATGRPPWGGDVSNPMAAILRIAQGNETPQFPTHFSNEGLDFLSKCLERDSAKRWTAEELLNHPFVSGNSRRNSQKKHACSPASVLEVQGFNAGYDSDEPESLEENDFSTRNPLTWCRVEGKATAMWPWEDSEFGSSGNWVTVRSG 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00714 358 SMART serkin_6 19 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00714 358 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Bva13g00714 358 Pfam Protein kinase domain 21 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00714 358 CDD STKc_MAPKKK 18 278 - -
Bva13g00714 358 ProSiteProfiles Protein kinase domain profile. 19 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00714 358 Gene3D Transferase(Phosphotransferase) domain 1 16 324 - -
Bva13g00714 358 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1-LIKE 5 357 - -
Bva13g00714 358 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Bva13g00714 358 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 5 357 - -
Bva13g00714 358 SUPERFAMILY Protein kinase-like (PK-like) 9 286 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00714 Bva-Chr13 3329541 3331273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00714 16 294 MAP Kinase Kinase Kinase AT1G54960 42.034 7.57e-71 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bva13g00714 Pkinase 3.4e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00714 K20716 - qsu:112028480 451.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00714 13 3329541 3331273 Bva13g00714 13 3329541 3331273 ECH