Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00708 ATGTTAATGGTTTATGATGATCCCTCAGACCAGAGATCACAAACTTTGGATGACAGAAACAGCACAGAGGAATCCCCTGATGAAACAAGGCTCTCTTTGGAAAAAAGTAATGATGCAATTCCATATATTGGTCAAAGATTTGCCTCTCATGATGCtgcttatgaattttataGTGAATTTGCTAAGAGGTGTGGCTTCTCAATTCGACGTCATCGTACAGAGGGAAAAGATGGGGTTGGAAAAGGACTTACAAGAAGGTACTTTGTTTGTCATCGTGCTGGTAATACTCCCGTCAAAACGTCAACTGAAAGTATACCTCAACGAAATCGGAAATCTTCTCGTTGCAGCTGTCACCAGTTTGAGTTCTCTGGAATTCTCTGTAGACATGCTCTTCGAGTTCTTTCAACAGGAAATTGTTTTCAGATTCCAGATATGTATCTTCCCATTGGATGGCGTCGAATCAGCATGCCATCTGCCAAGCCTCTTCAGAGTGCACCCAATGATCATGCTGAAAGAGTACAGCAGTTGCAAAACATGGTTTCCTCTCTGATCACAGAATCCGCCAAATCTAAGGAGAAATTAGATTTAGCAAAAGAGCAAGTTTCTATCCTTCTCTCTCGAATCAGAGCTCAGCCAATTTCATTACAAGGTGTTAGAGATATGTCCACAATCAATAGGAATTTTTG 686 0.4038 MLMVYDDPSDQRSQTLDDRNSTEESPDETRLSLEKSNDAIPYIGQRFASHDAAYEFYSEFAKRCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPVKTSTESIPQRNRKSSRCSCHQFEFSGILCRHALRVLSTGNCFQIPDMYLPIGWRRISMPSAKPLQSAPNDHAERVQQLQNMVSSLITESAKSKEKLDLAKEQVSILLSRIRAQPISLQGVRDMSTINRNF 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00708 228 MobiDBLite consensus disorder prediction 11 34 - -
Bva13g00708 228 MobiDBLite consensus disorder prediction 1 35 - -
Bva13g00708 228 PANTHER PROTEIN FAR1-RELATED SEQUENCE 11 101 209 - -
Bva13g00708 228 PANTHER PROTEIN FAR1-RELATED SEQUENCE 11 5 118 - -
Bva13g00708 228 SMART 26again6 113 140 IPR006564 GO:0008270
Bva13g00708 228 Pfam SWIM zinc finger 113 136 IPR007527 GO:0008270
Bva13g00708 228 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 101 209 IPR031052 GO:0006355
Bva13g00708 228 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 5 118 IPR031052 GO:0006355
Bva13g00708 228 Pfam FAR1 DNA-binding domain 55 118 IPR004330 -
Bva13g00708 228 ProSiteProfiles Zinc finger SWIM-type profile. 100 138 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00708 Bva-Chr13 3311188 3311874 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bva13g00708 FAR1 2.1e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00708 - - rcu:8288679 223.016