Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00706 ATGTCTGTCCCATTGAAAGTCTTGATTATAAGCCTACCAGATGCTCATTCTATTTTGGCCCCAAGTACCCTCTTTGTCAAGatttttgtttcaatcttTGGAGTTGCTGCGGGATTAGTTGTGGGTAAAGAAGGACCTATGGTGCACATTGGTGCTTGCATAGCTAATTTACTTGGACAAGCTGCTGGAGTCGCTGCAGCCTTCCGTGCACCAGTTGGTGGAGTCCTTTTTGCACTTGAGGAAGCAGCTTG 251 0.4462 MSVPLKVLIISLPDAHSILAPSTLFVKIFVSIFGVAAGLVVGKEGPMVHIGACIANLLGQAAGVAAAFRAPVGGVLFALEEAA 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00706 83 Pfam Voltage gated chloride channel 19 82 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bva13g00706 83 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 14 61 - -
Bva13g00706 83 SUPERFAMILY Clc chloride channel 13 82 IPR014743 -
Bva13g00706 83 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 59 83 - -
Bva13g00706 83 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 59 83 - -
Bva13g00706 83 Gene3D Clc chloride channel 5 83 - -
Bva13g00706 83 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 14 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00706 Bva-Chr13 3305249 3306121 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00706 14 83 Ion Channels AT5G49890 57.843 4.75e-25 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00706 K05016 - egt:105960599 102.064