Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00705 ATGGAGTTTTGCCGGGGCGGGAGATGTGGTCTTTTTGGGGAAGGAGGTCTGATGACGTTTGATGTTAATGAAGTAAAGCCAGCATACAGCACACCCGACTTGCTAGTGGTTATATTTCTTGGAGTCATTGGAGGCGTTTTGGGAAGCCTCtacaattttcttatatacagCACATATAGCATGATCAATGAGAAGGGTCCTATATATAAACTCCTACTTGTCTTGACTATCACCTTATTGACCTCTTGGTGTTCATTTGGCCTCCCATGGATATCACAGTGCATACCTTGTCCTGCAAGCGCTGGAGATCAATGCCCCACAGTAGGCCGTTCTGGACATTTCAAGAGTTTCCAATGTCCGCCTAACCACTACAATGACCTTGCCTCTCTTTTCTGTACCACTAACAATGATGCTATACGCAACCTATTTGTCTCTGGCACTGACAAGGAATTCCAGCTCTCTAATCTTCTAATCTTCTTTGTGGCCATATATTTCCTGGGAATCATCACTTATGGCATTGCTGTTCCCTCTGGTCTTTTTATTCCTGTCATACTTGCCGGAGCTTCATATGGCCGTCTTGCCGGGAGACTTCTGAGTTCAATCACTGTTCTTGATGTGGGCTTGTTTGGACTCCTTGGAGCTGCATCATTGCTTGGTGGCACCATGAGAATGACTGTTTCCCTTTGTGTTATACTTCTTGAACTCACTGATGATCTCTTTATGCTCCCATTGGTCACACTTGTTCTCCTTATTTCAAAGACAGTAGCTGATAATTTCAACAGTGGTGTTTATGATCAAATTGTGAAACTGAAGGGTCTGCCTTATCTGGAAGCACATGCAGAACCATACATGAGGCAGTTGATGGCAAGCGATGTCGTTTCAGGGCCGTTGGTTACATTTTCAGGGTTTGAAAAAGTGGAGAATATAATGCTTGCTTTGAAAGTAACAGGGCATAATGGGTTTCCTGTAATTGATGAGCCTCCTTTCACTGATGCCCCTGAGTTGTGTGGGTTGGTTTTGAGGTCTCATCTTCTTGTGCTGCTCAAGAATAAGAGGTTCTTATA 1064 0.4342 MEFCRGGRCGLFGEGGLMTFDVNEVKPAYSTPDLLVVIFLGVIGGVLGSLYNFLIYSTYSMINEKGPIYKLLLVLTITLLTSWCSFGLPWISQCIPCPASAGDQCPTVGRSGHFKSFQCPPNHYNDLASLFCTTNNDAIRNLFVSGTDKEFQLSNLLIFFVAIYFLGIITYGIAVPSGLFIPVILAGASYGRLAGRLLSSITVLDVGLFGLLGAASLLGGTMRMTVSLCVILLELTDDLFMLPLVTLVLLISKTVADNFNSGVYDQIVKLKGLPYLEAHAEPYMRQLMASDVVSGPLVTFSGFEKVENIMLALKVTGHNGFPVIDEPPFTDAPELCGLVLRSHLLVLLKNKRFL 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00705 354 ProSiteProfiles CBS domain profile. 288 354 IPR000644 -
Bva13g00705 354 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 1 353 - -
Bva13g00705 354 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 1 353 - -
Bva13g00705 354 PRINTS Plant CLC chloride channel signature 6 13 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bva13g00705 354 PRINTS Plant CLC chloride channel signature 127 143 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bva13g00705 354 SUPERFAMILY CBS-domain pair 280 353 IPR046342 -
Bva13g00705 354 Pfam Voltage gated chloride channel 20 257 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bva13g00705 354 Gene3D Clc chloride channel 8 277 - -
Bva13g00705 354 SUPERFAMILY Clc chloride channel 23 279 IPR014743 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00705 Bva-Chr13 3303416 3306452 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00705 1 353 Ion Channels AT5G49890 71.429 3.37e-173 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00705 K05016 - jre:108988922 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00705 13 3303416 3306452 Bva13g00705 13 3303416 3306452 ECH