Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00694 ATGGAACTTTCCATTCAAGAAGGAgaaatcccaatcccaataaACAGTACTTATGGCGGTGGGGGACATGGTAATGGCCATGGACATGGGCATGGGCACATGATCCATCATGACCCTCCTCACCATAACCATATTATCTCTTCCTCCACGCCCCAAAACCCTTCCAATGGCTCCTCGATGCAAGCAAGCCTGCAGGAAGATCATGGGCCGTTCAAGAAAACGGTGAGGTACAGAGAATGCCTAAAGAACCATGCAGCAGCCATGGGAGGGAATGCCACTGATGGGTGTGGTGAGTTCATGCCAAGTGGAGAAGAAGGAACAATAGAAGCTCTCAATTGCTCTGCCTGCCATTGTCACAGAAACTTCCATAGAAAAGAAGTAGATGGTGAACCCTCTTCCTTTGATTACCACCACGCCTCACATTTCAACAGGTTGGGGAGAAAATTCATTCTAGGCCATCACAAGAATCTCATAGCTCCTGAAGGTCTGGGGTACCCTACAGGTAACATTCTACCTTCAAGAAGTGTGCCACCCCACCAGATGATAGTGCCCTACAGCATGGGATCACTTCCTTCAGAATCTGATGAACAAGAAGAAGCAGCCGGTGGCGGTGGAATGGTGGCCAGACCTCCACAGCTAGTAAAGAAAAGGTTCAGGACAAAGTTCACACCGGAGCAGAAGGAGAAGATGCTCGACTTTGCAGAGAAAGTTGGGTGGAAAATTCAAAAGCAAGAAGAGTCTGTGGTGCAACAGTTGTGCCAAGAGATTGGGGTCAAGAGAAGAGTCCTCAAGGTTTGGATGCACAACAATAAACACAATCTAGCCAAAAAGAACCCCATGCCACCTGCTTA 851 0.4724 MELSIQEGEIPIPINSTYGGGGHGNGHGHGHGHMIHHDPPHHNHIISSSTPQNPSNGSSMQASLQEDHGPFKKTVRYRECLKNHAAAMGGNATDGCGEFMPSGEEGTIEALNCSACHCHRNFHRKEVDGEPSSFDYHHASHFNRLGRKFILGHHKNLIAPEGLGYPTGNILPSRSVPPHQMIVPYSMGSLPSESDEQEEAAGGGGMVARPPQLVKKRFRTKFTPEQKEKMLDFAEKVGWKIQKQEESVVQQLCQEIGVKRRVLKVWMHNNKHNLAKKNPMPPA 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00694 283 MobiDBLite consensus disorder prediction 44 65 - -
Bva13g00694 283 Pfam ZF-HD protein dimerisation region 75 127 IPR006456 -
Bva13g00694 283 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 76 127 IPR006456 -
Bva13g00694 283 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 42 279 - -
Bva13g00694 283 PANTHER - 42 279 - -
Bva13g00694 283 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 215 271 IPR006455 -
Bva13g00694 283 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 77 126 IPR006456 -
Bva13g00694 283 Gene3D - 206 277 - -
Bva13g00694 283 MobiDBLite consensus disorder prediction 1 65 - -
Bva13g00694 283 SUPERFAMILY Homeodomain-like 213 276 IPR009057 -
Bva13g00694 283 CDD homeodomain 216 269 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00694 Bva-Chr13 3217317 3219655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00694 1 278 ZF-HD Transcription Factor Family AT1G14440 49.175 1.51e-79 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Bva13g00694 ZF-HD_dimer 1.5e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00694 - - vvi:100247287 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00694 13 3217317 3219655 Bva13g00694 13 3217317 3219655 ECH