Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00675 ATGGAGTTTTCAGGGCCATCACCAAGTTTTCCATTTAGAAACATTCaagagatgaaaaagaaggatGATATTATGATCACCGATTCTTCTCTTGGTTCATCAAATCTGACCCACAATGTACACTACACCGTCTTCCCCAATTTTTCTCGCTGGCAGAGAATTCACATGGGAAAGTGTTGTCTACTGGATTGGCACAGAGCCATTTCTGTACATTGCAGACCTGGCGAAGAGACGGGGTTAGCCCAGTCATTCTGTCCCCTTAACTTGAAGaattgtaattttcttgcaaCTCTTTTGGGTTCCctcaaatttttaagagaacTAATTTGGATCGGTTCCATGGAATCTCCGGTTGCAGAACCGTTCCAAGACAGAGATAGCAGTTCATTCGCATTGATCAAGACAACTAGGCATGGAGCAAAGACTCATGATGAAGAAGGCAGGCTTAGATTTCATCTTCAGTCTTTTGTGTCATGCGGTGCTGCCTCAAACAGGACAATAGTGGCCTTATGGAGAACAAAATTGTTAACCCCTGAGCAGAAAGCACAAATTGCAGAAGACCAGGAAGATCAAGAAGACTTTTTAATTCCGGGCAAGTCCGGAATGTCTATAATACTCTGCAGAACTTCCAATCAAGGCAGTATCTGGTTTTGGGGGAAACTTGAAGTAGGAATGTCTAGAGGATACTTGCTTAATTCAAAGCCATGTCCCAAGTGCAAGCGACCAATGGAAAAAAACCAGGACCATGGTGAAAGGACTGGTGGTTTCTATGCTTGCAATCGTTATGAGGCTGCTGAACTAGGAGTGTGTGATGAGGctgaaaggagaagagaaatggCAAAGAATTCCTTGGAGAGATA 860 0.4023 MEFSGPSPSFPFRNIQEMKKKDDIMITDSSLGSSNLTHNVHYTVFPNFSRWQRIHMGKCCLLDWHRAISVHCRPGEETGLAQSFCPLNLKNCNFLATLLGSLKFLRELIWIGSMESPVAEPFQDRDSSSFALIKTTRHGAKTHDEEGRLRFHLQSFVSCGAASKTIVALWRTKLLTPEQKAQIAEDQEDQEDFLIPGKSGMSIILCRTSNQGSIWFWGKLEVGMSRGYLLNSKPCPKCKRPMEKNQDHGERTGGFYACNRYEAAELGVCDEAERRREMAKNSLER 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00675 285 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 247 285 - -
Bva13g00675 285 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 229 246 - -
Bva13g00675 285 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 247 285 IPR031127 GO:0004842|GO:0016567
Bva13g00675 285 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 229 246 IPR031127 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00675 Bva-Chr13 3098001 3101029 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00675 229 285 ARIADNE family AT1G05890 59.756 1.79e-20 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00675 K11968 - egt:105959535 95.5153