Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00670 ATGGTAAAAAGGGAGAAGCGGGAAAGCTGGAAATCTGCTCTCACAAAAGCAGCTAATTTAGCTGGCTGGGACACTCGCCATAGAGTTGAATCTGAATTGATTGAGGACATTGTGAAAGATGTTTTgcgaaaattaaaatatagacaTCCATCAGATGAACTAAAAGGAATTTTTGGAGTTGATGAAAATTATGCACAAGTTGAATCACTATTGAGGAAAGAAGAGTCAGAAGAAATTCTAGTAATTGGACTTTGGGGAATGGGTGGCATTGGAAAGACGACTATTGCCACTGCTTTACTTACCAAACTCTGTTCTCAATATGAAACTAGCTGCCTTTTGGAAAATGGAACCGAAACAGTTGAAGGCATAATGTCAAATGTGTCTGAAATTAGAGATGTGTCCTTGAGTTCTGATGCCTTTAGAAAGATGACTCGATTAAGATTTCTCAAATTCTTTACCTCTTCTGGAAGAGATTGTAATGTGCACCTTCCAAAAGGTCTTGAGTCATTGTCTAGTAAATTAACGTATTCTCGTTGGGATAAATACCCTGCACCGTCTCTACCATCAACTTTTTGTGCTGAGAAACTTGTTGAGCTTTCCATGGCAAACAGCTACCTTGAAAAACTTTGGGAAGGAGTCCAGAATGTTgtgaatttaaagaaaattgaccTTAGGGGGTGCAAAGAGCTGGTTGAGCTCCCAGATTTGTCCAGAGCCTTAAATCTTGAGTATGTGTGGCTGCAGCACTGTAAAAGATTGCATCATCTTCATCCATCTATTTTATCCCTTTACACGCTTGTTGAATTGGATCTGACTGAATGTAGAGAGCTTGAGAGTCTTCAAAGTGATATTCATTTTAGATCCGTCTCATTTTTCCGTCTCAGTAAGTGCACACGTCTTCAAGAAATTTCTGTGACTGATGAATTGCCCTTGTCAATGCCGCACATCCGCAAGCTTGAGAAATTGGATTTATGGATAGGGGAAGATGTTGAGAATATTCCGAACCAGTTATGTGGCCTGAGATTCCTTCACCAGTTTGATCTTTCTGGTTGTAACTTAATTAAACTCCCCAATGACATCAACCTTTTATCATCTTTATATGAATTATCACTCAGTGAGAACAACAGATTGAAGAGCTTGCCTACAAGCATCAAGAATCTTCCACATCTGAAGAAGCTTGACTTAAGCTATTGCAGCAGGCTTGAGTCTCTACCCGAGCTCCCACTATCTATCCAATTCTTAAATGCCAACTACTGCACTTCCCTACAGACAGTGCACAGCCCAATGCCTGAGGTCGAACCAATAAGACAATACTTTGCACTCCACCATTTCTTCTGGTTTTCATTCATTAATTGCCTGAAATTATATGAACATGCATTTGAGGGTATTATGGCATACGCCCACGTTAGAATAAAACAAGCAATAGAAACATGTTCATCCTATTCTGGGTCATGTAGTGGAAGAGTATATCTGTATTTGCCAAAATGCCAAATTCCTGAGTGGTTCAGTTATCGAACAACAGAAGGTTCTCTAACTATGGATCTGCCTCTAAATTTCAGCTTGAAGGGTTTCATCTTCTGCATGATTCTTCCTCAGCATTGCCAATATGAAGTAAATGGCCTATGTAAATTCTCCACGGAAGCAAGTAATGGGGAAAAAGTGGATTGTGAAAGTACATGCCCTGGCAAAATGGCATCAAATTTGGGTTCGGGTCATGTATCATTATGGTATGATCCCCGGTTTAATCTTGAAATAATTGGGGCAATTCAAAGAAGCAGAGCTCTTGATCCTTGTGCCACTTCTACCACAAAGGTTTCGTTTCAATTTTATGCTGTATCGCCGCCGCCCGAACTACGATCTGCAGTTGAGGAGGTAAACCAATCAGCAGAAGGGGGAGTATACCCGATATATGCCTCAGAATATGAcaattttcttaaacaaaGAGGATTGGAGTTGGAGTTTGGTAACAAAACCAAGAGATGTCGGGATACAGATGATGATTTGGATTTGAAGACAACTAGAATTGAAGTTGGAGGGCAAAAACTACTCCCTTTTACAGCAAAGAAATCTATACTACAACACCTTGGATTGGGATTGGAGGAGTTAAGAGCAGAGTGCAGCTGGAGTTGGAGGCTCTG 2138 0.3962 MVKREKRESWKSALTKAANLAGWDTRHRVESELIEDIVKDVLRKLKYRHPSDELKGIFGVDENYAQVESLLRKEESEEILVIGLWGMGGIGKTTIATALLTKLCSQYETSCLLENGTETVEGIMSNVSEIRDVSLSSDAFRKMTRLRFLKFFTSSGRDCNVHLPKGLESLSSKLTYSRWDKYPAPSLPSTFCAEKLVELSMANSYLEKLWEGVQNVVNLKKIDLRGCKELVELPDLSRALNLEYVWLQHCKRLHHLHPSILSLYTLVELDLTECRELESLQSDIHFRSVSFFRLSKCTRLQEISVTDELPLSMPHIRKLEKLDLWIGEDVENIPNQLCGLRFLHQFDLSGCNLIKLPNDINLLSSLYELSLSENNRLKSLPTSIKNLPHLKKLDLSYCSRLESLPELPLSIQFLNANYCTSLQTVHSPMPEVEPIRQYFALHHFFWFSFINCLKLYEHAFEGIMAYAHVRIKQAIETCSSYSGSCSGRVYLYLPKCQIPEWFSYRTTEGSLTMDLPLNFSLKGFIFCMILPQHCQYEVNGLCKFSTEASNGEKVDCESTCPGKMASNLGSGHVSLWYDPRFNLEIIGAIQRSRALDPCATSTTKVSFQFYAVSPPPELRSAVEEVNQSAEGGVYPIYASEYDNFLKQRGLELEFGNKTKRCRDTDDDLDLKTTRIEVGGQKLLPFTAKKSILQHLGLGLEELRAECSWSWRL 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00670 712 SUPERFAMILY L domain-like 133 496 - -
Bva13g00670 712 Gene3D - 1 45 IPR035897 -
Bva13g00670 712 Pfam Leucine Rich repeats (2 copies) 368 408 IPR025875 -
Bva13g00670 712 Pfam NB-ARC domain 66 107 IPR002182 GO:0043531
Bva13g00670 712 Pfam Leucine Rich Repeat 195 214 IPR011713 -
Bva13g00670 712 Pfam C-JID domain 493 616 IPR045344 -
Bva13g00670 712 Gene3D Ribonuclease Inhibitor 322 433 IPR032675 -
Bva13g00670 712 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 129 543 - -
Bva13g00670 712 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 19 128 - -
Bva13g00670 712 Gene3D Ribonuclease Inhibitor 188 321 IPR032675 -
Bva13g00670 712 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 119 IPR027417 -
Bva13g00670 712 Gene3D - 46 150 IPR027417 -
Bva13g00670 712 PRINTS Disease resistance protein signature 385 401 - -
Bva13g00670 712 PRINTS Disease resistance protein signature 81 96 - -
Bva13g00670 712 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 129 543 IPR044974 GO:0006952
Bva13g00670 712 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 128 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00670 Bva-Chr13 3084587 3089742 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00670 114 393 WRKY Transcription Factor Family AT4G12020 34.539 1.60e-32 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00670 - - mtr:MTR_4g043630 371.703