Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00659 ATGTATCAGAGTGTTCCTAGTTCAATTCTAGTTCGCAGCAACTCATTAGTTCATGGTCAGCATTTAGATTGCGGTGGCAGTACAATGGATCCCACCAATGGAGGGAACAACCTTAACAACCCTAATCTCTCCTCAAAGCAACGGCTACGCTGGACCCATGAGCTTCATGAACGCTTTGTTGATGCTGTAGCACAACTTGGTGGGCCAGATCGTGCCACACCTAAAGGCGTCCTCAGAGTTATGGGTGTGCAAGGCTTAACAATATACCATGTCAAAAGCCATTTACAGAAATACCGACTTGCAAAATACCTCCCTGATTCATCATCTGATGGGAAAAAAGCTGACAAGAAAGAAGCAGGGGATATGCTTTCCAATCTAGATGGTTCATCTGGGATGCAAATTACTGAAGCATTAAAGCTGCAAATGGAGGTACAGAAACGATTGCATGAGCAATTAGAGGTGCAGAGACAGCTACAATTAAGAATAGAAGCCCAGGGTAAATACTTGAAGAAGATAATTGAAGAGCAACAGCGGCTCACTGGGGTTCTCTCGGAAGCACCTGGTTCTGGGGTTGCAGCCACAGTTCCAGGTGATATGTCCCAAGAACCGGACAATAAGACTGACCCGGCAACCCCTGCCCCAACCTCTGAGTCTCCCCTTCAGGAAAAAGCAGCAAAAGAACGCGCCTCGGCGAAGAGTCTTTCAATTGAtgaatctttttcttctcaccaTGAACCACTGACACCGGATTCGGCTTGCCACGATGTTTCCCCTATTGACACTGACAGCCCTAAAGCTGAGAGATCAACAAAGAAGCAAAGGGTGAGTTTGGAGGGAGCATATTCAAAACCAGATGTGGTGCTTCCTCATCAGATACTGGAGTCAAGCATCTCGTCGTACCAACAAACAAGCAATGTTTACCAGCAGTTTGATCCTTCATTGGGTATGTCTACCAGAAGTAATGAGGAATTGGAAAAAGTCGGTGGCAGCAATCTGTG 998 0.4549 MYQSVPSSILVRSNSLVHGQHLDCGGSTMDPTNGGNNLNNPNLSSKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDGKKADKKEAGDMLSNLDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLTGVLSEAPGSGVAATVPGDMSQEPDNKTDPATPAPTSESPLQEKAAKERASAKSLSIDESFSSHHEPLTPDSACHDVSPIDTDSPKAERSTKKQRVSLEGAYSKPDVVLPHQILESSISSYQQTSNVYQQFDPSLGMSTRSNEELEKVGGSNL 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00659 332 MobiDBLite consensus disorder prediction 200 218 - -
Bva13g00659 332 Pfam Myb-like DNA-binding domain 49 99 IPR001005 -
Bva13g00659 332 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7 3 324 - -
Bva13g00659 332 Gene3D - 45 104 - -
Bva13g00659 332 Coils Coil 135 155 - -
Bva13g00659 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 103 IPR017930 -
Bva13g00659 332 MobiDBLite consensus disorder prediction 184 287 - -
Bva13g00659 332 Pfam MYB-CC type transfactor, LHEQLE motif 132 178 IPR025756 -
Bva13g00659 332 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 324 IPR044848 GO:0003700
Bva13g00659 332 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 46 101 IPR006447 GO:0003677
Bva13g00659 332 SUPERFAMILY Homeodomain-like 44 100 IPR009057 -
Bva13g00659 332 MobiDBLite consensus disorder prediction 260 274 - -
Bva13g00659 332 MobiDBLite consensus disorder prediction 311 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00659 Bva-Chr13 3032940 3036656 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00659 81 332 G2-like Transcription Factor Family AT2G01060 65.613 1.84e-100 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva13g00659 Myb_DNA-binding 2.2e-08 CL0123