Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00658 ATGTTTCCAAGGCTGATACATCCCCATGAAGGGATAGTTGCGCAGGAAGACATGCAGGGTGGTTCGAACCTCGGTCACAAAGCTGACCCATGTCTAGTGTTGACAGCTGACCCGAAACCTCGACTTCGGTGGACGGCGGATCTTCACGAACGGTTCGTTGATGCTGTTACTCAGCTTGGGGGTGCAAGTAAAGCTACACCAAAAGCAATCATGCGGACCATGAATGTCAAGGGCTTGACTCTCTTTCATTTAAAGAGTCATCTTCAGAAATACAGACTTGGTAAGCAATCTGGAAAAGATATGGGTGAGGGATGCAAAGATGGATTGTCGGGCTCTTATCTTTTAGAAAGCCCTGGTACTGACTCGTCTCCAAAGTTACCAAATTCTGATGCAAACGATGGTCATGAAATCAAAGAGGCATTACGAGCACAGATGGAGGTGCAGAGTAAGCTACATTTGCAAGTGGAGGCAGAGAAACACTTGCTGATTCGTCAGGATGCCGAGCGGAAGTATATGGCCATGCTTGAAAGAGCTTGCCAGATGTTGGCTGATCAAGTCATTGGCGCTACCGTGATAGACACGGAAAACCAAAAGTTTCAAGAACTGGGGAGTAAAGCACCCAGAAGTCCAGTGCTTGATCCTCTTGGCTTTTACTCTTTACCATCTGCTGAGGTTTCTGGGGTGCATGccccagaagaagaaatacCACCTAGTCTCCAGCACCAAAGGGCTGACTGTTCTACCGAAAGTTGCCTAACATCGCATGAGAGTTCTGGAGGGTTGAATTTGGAAGGATCTCCTGGTGCCGGAAAAAAGAGGATGCTGAGCATGGACTCCATGGCAGCAGCACCTTTGATCTGGAACGAAGCCAAGATGAGAACTCAAGATATCAATGTAACCCAAGGTAATCCTCATGGAATAACTAGGTATGGCATATA 938 0.4648 MFPRLIHPHEGIVAQEDMQGGSNLGHKADPCLVLTADPKPRLRWTADLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEGCKDGLSGSYLLESPGTDSSPKLPNSDANDGHEIKEALRAQMEVQSKLHLQVEAEKHLLIRQDAERKYMAMLERACQMLADQVIGATVIDTENQKFQELGSKAPRSPVLDPLGFYSLPSAEVSGVHAPEEEIPPSLQHQRADCSTESCLTSHESSGGLNLEGSPGAGKKRMLSMDSMAAAPLIWNEAKMRTQDINVTQGNPHGITRYGI 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00658 312 MobiDBLite consensus disorder prediction 115 129 - -
Bva13g00658 312 Gene3D - 38 96 - -
Bva13g00658 312 MobiDBLite consensus disorder prediction 235 268 - -
Bva13g00658 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 96 IPR017930 -
Bva13g00658 312 SUPERFAMILY Homeodomain-like 39 95 IPR009057 -
Bva13g00658 312 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 39 94 IPR006447 GO:0003677
Bva13g00658 312 Pfam Myb-like DNA-binding domain 42 92 IPR001005 -
Bva13g00658 312 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 2 311 IPR044848 GO:0003700
Bva13g00658 312 Pfam MYB-CC type transfactor, LHEQLE motif 136 181 IPR025756 -
Bva13g00658 312 MobiDBLite consensus disorder prediction 107 133 - -
Bva13g00658 312 MobiDBLite consensus disorder prediction 241 261 - -
Bva13g00658 312 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00658 Bva-Chr13 3024415 3028513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00658 21 254 G2-like Transcription Factor Family AT3G24120 45.783 3.50e-60 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva13g00658 Myb_DNA-binding 8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00658 - - gmx:100786397 510.375