Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00621 ATGGACCTCTTCACCGGCGACGACTTCCCTGGCCACGTGGCTCCATTTTCTGATGGCAGTGACCTTCTTTACGCTGAGCCAACGGCTCTGATTCACCCTCCAGAGATAATAACCCGTGGACACGGTCACAACCCGCCGGCACAGAAGCTCCGACCTATCAGGTGCAACGGCAGGTCTTCGCCGGTTTCTCGGGTGGCTGAGCTGCCGGAAAATGCAGTGCTCGTGGGTACTCCGTTTTGTTGCCAGAACATGGCGTCCTCGGACGTGGATTACCTCAGTAATCAGTTGTGTGTCGCTAATGGTGAGTCAAGTTTGGATTTTGATTGTAGTGGAAATCAAGAAGCTAGCGAGgtgttgaagaagaaagattgcGGCGATGTTGCAGAAAATGCTTGCGTTCAGATGGAGGATCCGGTGCAGCCCGGTTCGGGGGATGTCGCAAAAATTTGGGACCCGAACATCATAGAGAGCTTCTTAGGGCAGGATTCTAGCTCCTCTTCAGATGGTGACTACGATTCAATTAGAGGTACTACAGAACCTGGCAGTGGAAGGAGAGGGAAAAAGACAGAGAAAAAGCTTGAAGattttgtagaaaatttgGTTATGAAAGTGATGGAGAAGCAAGAGCAGATGCATAAACAACTAGTGGATATgatagaaaagaaggaaaaggaaagagcaATGAGAGAAGAAGCTTGGAAGCAGAAGGAGATGGAAAGAATCAAGAGGGATGAGGAGGCACGAGCCCAAGAAAAAACTCGTAACTTAGCCTTGATATCCTTTATTCAGAATTTATTAGGGTATGAGATTCAAATCCCCCAGCCAGTAAACATCtttagagaagaagaagaagatgaggaaAACATCCAGAAAGACTTGAAGAGTGATCCAAGTTGTAACAGATGGCCAGAAACTGAAGTGCAAGCACTCATAACTCTAAGAACTTCCTTAGAAAGCAAATTTCGTCTTATGGGATTTAAGGGTTCTATATGGGAGGAGATATCTGAAGCAATGAATAACATGGGCTACAACCGTTCTGCAAAGAAGTGTAAGGAGAAATGGGAAAACATCAATAAGTACTATAAAAGGACAATGGGAAGCGGGAAGAAGCGGCGTCTTAATGGTAAAGCTTGTCCTTACTTTGACGAGTTGGATATTTTGTACAGGAATGGTTTCTTGAATCCTGGAAATGCCTTGAGCAATACCAACAACGTTGCCAAGATTGAAAAGGAGTA 1235 0.4267 MDLFTGDDFPGHVAPFSDGSDLLYAEPTALIHPPEIITRGHGHNPPAQKLRPIRCNGRSSPVSRVAELPENAVLVGTPFCCQNMASSDVDYLSNQLCVANGESSLDFDCSGNQEASEVLKKKDCGDVAENACVQMEDPVQPGSGDVAKIWDPNIIESFLGQDSSSSSDGDYDSIRGTTEPGSGRRGKKTEKKLEDFVENLVMKVMEKQEQMHKQLVDMIEKKEKERAMREEAWKQKEMERIKRDEEARAQEKTRNLALISFIQNLLGYEIQIPQPVNIFREEEEDEENIQKDLKSDPSCNRWPETEVQALITLRTSLESKFRLMGFKGSIWEEISEAMNNMGYNRSAKKCKEKWENINKYYKRTMGSGKKRRLNGKACPYFDELDILYRNGFLNPGNALSNTNNVAKIEKE 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00621 411 PANTHER - 9 407 - -
Bva13g00621 411 MobiDBLite consensus disorder prediction 158 190 - -
Bva13g00621 411 Pfam Myb/SANT-like DNA-binding domain 300 385 IPR044822 -
Bva13g00621 411 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 9 407 - -
Bva13g00621 411 MobiDBLite consensus disorder prediction 158 173 - -
Bva13g00621 411 Coils Coil 235 255 - -
Bva13g00621 411 Coils Coil 205 225 - -
Bva13g00621 411 ProSiteProfiles Myb-like domain profile. 294 358 IPR001005 -
Bva13g00621 411 CDD GT1 300 364 - -
Bva13g00621 411 Gene3D - 302 363 - -
Bva13g00621 411 SMART sant 298 360 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00621 Bva-Chr13 2833290 2836005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00621 5 390 Trihelix Transcription Factor Family AT5G47660 35.377 1.04e-54 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bva13g00621 Myb_DNA-bind_4 6.9e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00621 - - csv:101216718 371.703