Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00606 ATGACATCTATACCGTCAAAAAATCTATGGATTCGACGGCAACAATGCCCATGTGGGGATTGGAAATGTTATATTGCGTATGAGGGCGGTGCTGAGGAGGCTTCTCCCGCGCCAGAAGAATTGGTGAATACAGAGAAAGCATCACCGGAAGCAATAGTTGCTCCATATGTTGGAATGTTGTTTAAGAGTGATGATGACGCATTTGAGTATTATGGGAAGTTTGCTAGGAAAAATGGGTTCTCTGTTAGGAAAGAAAGATCAAGACTTAGCCCCCAGTTGGGCGTTTACAAGCGTGACTTTGTTTGTCACCGTTCTGGGTTTGCCCCAGCGAAGAAATCTAATGGAGGACATCAGAGAGATAGGAAATCGGTACGATGTGGATGTGATGCAAAAATGCACCTGTCAAAGGAGATAGTTGAGGGGGTTTCCCAATGGTTTGTTGCACAATTTAGTAATGTACATAATCATGAGCTTTTGGAAGATGACCAAGTGCGCCTTCTTCCAGCATATCGTAAAATTAACGAGGCTGCTCAAGAACGTATATTATTGCTTTCCAAAGCTGGGTTTCCGGTAAATCGGATAGTGAAGATGCTTGAGCTGGAAAAGGGGATTCAAGGTGGTCAAATGCCTTACATGGAAAGGGACGTGAGAAACTTTGTTCAAAACTGTAAGAAAGTTGTTCAAGAAAATGAGGCAATGCTCagtgaaaagagagaaaatgatatattggAACTTGTTAGAGCATGCAAAGCCATGAAAGAGGCAGATGATGGCtttgtttatgattttacaATGGATGAGCACAATAATGTCGCAAACATTGCTTGGTCATATGGTGTCTCAGTTAATGCATATTCTATGTTTAATGATGTAGTTTATTTTGACACTCCGTATCGATCAATCATGTATGGATTGCTTATAGGAGCATGGTTTGGCATTGACAACTATGGTAGAACCATTTTCTTTGGTTGTGTTTTATTGCAGGATGAAACACGGCGATCTTTCTCATGGGCATTACAGACTTTTGTCCGATTCATGGGAGGAAGATATCCGCAAACAATAGTAACCGATCTTGACCCTGAGCTTAGAGATGCCGTAAGAAGGGAATTGCCAGGCACTAAGCATGTCATTtctatatgtaatattatgtCCAAGGTACCCAGCTggttttctcttcctcttggTTCTCGCTATGAAGAATTCAAATCTGAGTTCGATGCCTTATATCATATGGATAATGCAGAGGAGTTTGAACTTCGATGGAACCAAATGATTTCTGCGTTTGGACTTGGTGCAGATAAGCATATCGATCTACTATATTATGTGCACGCATCTTGGGCACTATCctatataaaagttttctttctgGCTCGAATAGAGAAAACTGCATACTCAAAGTCTACTGATGCATTTTTGAAAGGGATCTTCAATGTGCAGACATGTTTGCCTAGGTTTTTTGAGCAGGTTGGAGTTGCTGTAAATATTCAGCATCAAGCACGTCAGGAGACTCAACATGTATATCTTAAAACTTGTATACCCATTGAAGAGCAGGCACGGAGCATTCTCACACCTTTTGCTTTTAGTGCTTTACAACGAGAATTATTGCAAGCAATGGAATATGCTACATCTGAAATGCCCAACGGATCATATATTGTCCGCCACTTTAAAAGAATGGATGGAGAACGTCTTGTAATATGGTTACCTGAAGAAGAACAAATACACTGCTCTTGCAAGGAGTTTGAATTCTCAGGAATATTATGCAGACATGCCCTTCGAGTATTTATAGCAAAAAACTACTTTGAGCTGCCTGAGAGATATTATTTGAATAGGTGGCGACGGGAATGCTCTTTACTACTTGATGCTGACCATAATAATCAAAGTGTTGATGATGAATGGTTTCAAGAGTATCAGTCTCTTGCTGAAACTTTATTTGCAAAATCATCAAGAACAAAGGAGCGATCCGATTATGTTCGCGGAGAACTGACAAAGGAACTTACTAGGATTCTTAGTGAGGTTAGAAATCTGCCCGAGACTGATGGAGTCACCATGGACTCGACTGTTTCACCAACCAGTAGAAATCTGCCTGGAACTAATGGAGTCGCCACGGACACGTCTGTGTCACCAACAAGTTA 2132 0.3949 MTSIPSKNLWIRRQQCPCGDWKCYIAYEGGAEEASPAPEELVNTEKASPEAIVAPYVGMLFKSDDDAFEYYGKFARKNGFSVRKERSRLSPQLGVYKRDFVCHRSGFAPAKKSNGGHQRDRKSVRCGCDAKMHLSKEIVEGVSQWFVAQFSNVHNHELLEDDQVRLLPAYRKINEAAQERILLLSKAGFPVNRIVKMLELEKGIQGGQMPYMERDVRNFVQNCKKVVQENEAMLSEKRENDILELVRACKAMKEADDGFVYDFTMDEHNNVANIAWSYGVSVNAYSMFNDVVYFDTPYRSIMYGLLIGAWFGIDNYGRTIFFGCVLLQDETRRSFSWALQTFVRFMGGRYPQTIVTDLDPELRDAVRRELPGTKHVISICNIMSKVPSWFSLPLGSRYEEFKSEFDALYHMDNAEEFELRWNQMISAFGLGADKHIDLLYYVHASWALSYIKVFFLARIEKTAYSKSTDAFLKGIFNVQTCLPRFFEQVGVAVNIQHQARQETQHVYLKTCIPIEEQARSILTPFAFSALQRELLQAMEYATSEMPNGSYIVRHFKRMDGERLVIWLPEEEQIHCSCKEFEFSGILCRHALRVFIAKNYFELPERYYLNRWRRECSLLLDADHNNQSVDDEWFQEYQSLAETLFAKSSRTKERSDYVRGELTKELTRILSEVRNLPETDGVTMDSTVSPTSRNLPGTNGVATDTSVSPTS 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00606 710 SMART 26again6 573 600 IPR006564 GO:0008270
Bva13g00606 710 MobiDBLite consensus disorder prediction 679 710 - -
Bva13g00606 710 PANTHER FAR1-RELATED SEQUENCE 10 ISOFORM 1 31 681 - -
Bva13g00606 710 ProSiteProfiles Zinc finger SWIM-type profile. 563 598 IPR007527 GO:0008270
Bva13g00606 710 Pfam MULE transposase domain 291 384 IPR018289 -
Bva13g00606 710 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 31 681 IPR031052 GO:0006355
Bva13g00606 710 Pfam SWIM zinc finger 569 598 IPR007527 GO:0008270
Bva13g00606 710 Pfam FAR1 DNA-binding domain 69 159 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00606 Bva-Chr13 2765789 2771529 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bva13g00606 MULE 1.1e-13 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00606 - - aprc:113874854 1102.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00606 13 2765789 2771529 Bva13g00606 13 2765789 2771529 ECH