Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00602 CGAGGGGGGAAGGGAGGCGAGGAGAGACTCTCCAAGCTCTGCAACCCTGACTTAGTCTTTGCGTCTTCTTCTTACTTCCTTCGGCTCTGAAATCCCAAGTCCATTGTGTTTCTCCTGCGAAGCTTGGAATGCGACCCAAGACTAGTCTCTAGTTCACTCTTACAGGAACTCTTTGCTCAGAAAGTATGcgtcttttcctttttttcctttgggcGGTCTTCTCTGAGCTCCCTTCGTTTGCCTTCGCGAGGTTCTGTTTTTGTTCAGGTGGTACCAACTTGATGAAGCTCCTGGTTCCATGGTATGACAAATGCAGTTTAAGCCTTCTGGGTTGAATATAGTCAAAGTTTGGGTCTTTAGAGCCTACTCTCATTTGTCAATCCAAAGCGGGTTTTATTCCCTTGCCTGATCCCTCGTTCTTTGCggctttatttattctctttattctctttgagAGGCAGCAAAGACTTTCATCTGGGTTCTCGTCTTTTTCGGATTTCTTTTCCCCTCGTTTAGAATGCATTGGCTTTGTGAGGCAAGGATTTCGTTTTAGGGTTTATTCACTGTAGTATCCCATCTTATTAGTTGATAAAAACAGCCGATCATAGTTTCATTGTGATTTTCCTGTTAATGTGATAAAGGGGCCCTTAGTCATAATGTCTGGGACTACAGCTGTTTTTGTGGAGTGGGAGGAGCAAATTATATGTCACGAGCGGGGGAATCGTGTAACTCATTTTTACTTGAAGTGTGCAAATGGGGATTCAGTGCTTGCTGTTATAGGGACAGAGAGGAGTGTAAGGCATATGATGTATGTTATCCCAGACCAATTTTTGCAGGTTTATGGGTCCATAGAATCGGTTTCTGCCTATAAATGGCGCGCAAGAAGAGAGGTGGTGGACTGGCTTACGTGTTTGGTCTCAAGGACTCATGAACAGTGTATAGATGATTTGAATTTTCAGATGAATGATTCAGCACAAGCTGTAGAGTCTCTTGAAATATTAGCACAAGCAGCTGGGGCCAGtgctaataaaaaaaattcacctgATAAATTGCTATGTGTCTcaaggaaattgaaatttcatagCTCAGATATTGAATGGTCAGGGACTGCTTGGTTTTGTGCTAAACAGCTTAAGCACTACCCTGGATTTTGTAGAAACGGGACAGCCATATctGTTCATTCTTTTGTATATGTTATGGCTGAAGAGGAGAGTCACTATCTTGGTTATGTGGAAGACATGTATGAAGACAAGAAGGGacaaaaaaaggttaaagtaCGATGGTTTCACCACAGTCAGGAAGTTAAGCGTATGATTCCACAGGTGAATCTACAACCAGGAGAAGTTTTCATCACTCCTCATGTTCAGGTGATTAGTGCTGAGTGTGTGAATGGTCCTGCAACAGTTTTGACTTCTAAGCATTATGAGAAATGCTTGGCTTCCATCCATCATATATCTTCATCTGAAGTTCATATGTGCTGTAGACAGTTTAAAAACAATAAGATCAAGCCCTTCAGTCTTACAAAGTTACGAGGTTATAGTAGCCAATCTATGCTTTCTTGTTTGGATAGTCCTACTGTATCAAAGAGAAAGGTCAAACAAGAGGAAGACGATCATGGCTTCACTGAAGATGATACTTCAAGGCCCAGCAATAAGAGGCATAGAAATTTTAAGGGGCATCAAGTACTTGAAAAGGATTTTTCTGGtctacaaaatattaatcctAGAAATCAGAAGACAAAGTCTGGACCGACACACCCAAGGTTGAAATTAAGATTTTCAAGAAAACCAATTGGCATTAAGGTTATTGGACCTAAAACACAATGTCTTATGTCTTTTAATGTTGGTGAAAAGATAGAGATTCTCTGTCAAGATAGTGGCATTAGAGGATGCTGGTTTAGGTGTAAAGTCTTGAACACATCCCACAGGCAGCTGAAAGTCCAGTATGATGATTTACTGGATGTAGATGGGTTGGGGAAGCTAGAGGAATGGGTCCCTGCATCTAGAGTGTCAGCTTCAGATAAACTTGGTATGCGATGTTCAGGCCGACTAACAGTAAGACCCTGCCCTCCTGATGATACCACAGACCGCACTTTTGACATTGGAGCTCCTGTGGATGCCTGGTGGAGTGATGGTTGGTGGGAAGGTGTTGTAACCGCTGTCAATGAGTGTGGAGATGGCACTTTGCAGATTTATTTCCCTGGTGAAGAGAAGTTTATAACGCTCGAGAAGAAGAACGTTCGGATTTCCCGAGATTGGGTTGGCAATAAGTGGGTTTATATACCGTGGAAGGCAGATATCTGCAGTTATTTATCCTCTAATGTTGGTTCTACGAGGAAGCTGTCCAATGATTCAGCTCTGGTTGATGTATCTGTGTCTGATGGTTCTGCAATATTAGGAATTAAACTCCCATCTATTCTCAAAGTTAAGGTTGAGCCAAAATTTGGTTTAGATTCATCTGATAACCTGGAGAGCATGAAGCGGGTGACATTGAGGAAGCTAATGCTTGCCATTGGAGAAGACCAAAGTAATGAATCTGGTGATGGGAGTGATGATGACACTGACGAAGACAGTAAGGAGAAGTTGATAGGGGAGGAAAGTTTTGATTCTGCAAAACTAAAACTCGATGCAGTGGAAGCAGTAACAGTTGCATG 2653 0.4052 MSGTTAVFVEWEEQIICHERGNRVTHFYLKCANGDSVLAVIGTERSVRHMMYVIPDQFLQVYGSIESVSAYKWRARREVVDWLTCLVSRTHEQCIDDLNFQMNDSAQAVESLEILAQAAGASANKKNSPDKLLCVSRKLKFHSSDIEWSGTAWFCAKQLKHYPGFCRNGTAISVHSFVYVMAEEESHYLGYVEDMYEDKKGQKKVKVRWFHHSQEVKRMIPQVNLQPGEVFITPHVQVISAECVNGPATVLTSKHYEKCLASIHHISSSEVHMCCRQFKNNKIKPFSLTKLRGYSSQSMLSCLDSPTVSKRKVKQEEDDHGFTEDDTSRPSNKRHRNFKGHQVLEKDFSGLQNINPRNQKTKSGPTHPRLKLRFSRKPIGIKVIGPKTQCLMSFNVGEKIEILCQDSGIRGCWFRCKVLNTSHRQLKVQYDDLLDVDGLGKLEEWVPASRVSASDKLGMRCSGRLTVRPCPPDDTTDRTFDIGAPVDAWWSDGWWEGVVTAVNECGDGTLQIYFPGEEKFITLEKKNVRISRDWVGNKWVYIPWKADICSYLSSNVGSTRKLSNDSALVDVSVSDGSAILGIKLPSILKVKVEPKFGLDSSDNLESMKRVTLRKLMLAIGEDQSNESGDGSDDDTDEDSKEKLIGEESFDSAKLKLDAVEAVTVA 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00602 665 MobiDBLite consensus disorder prediction 622 646 - -
Bva13g00602 665 Pfam Agenet domain 397 472 IPR008395 -
Bva13g00602 665 Gene3D - 137 303 IPR043151 -
Bva13g00602 665 MobiDBLite consensus disorder prediction 309 335 - -
Bva13g00602 665 PANTHER BROMO ADJACENT-LIKE DOMAIN PROTEIN 5 577 - -
Bva13g00602 665 SMART BAH_4 170 289 IPR001025 GO:0003682
Bva13g00602 665 MobiDBLite consensus disorder prediction 306 335 - -
Bva13g00602 665 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 5 577 - -
Bva13g00602 665 SMART agenet_At_2 478 536 IPR014002 -
Bva13g00602 665 SMART agenet_At_2 392 457 IPR014002 -
Bva13g00602 665 ProSiteProfiles BAH domain profile. 170 289 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00602 Bva-Chr13 2757451 2761234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00602 406 534 PHD Transcription Factor Family AT5G58610 30.075 6.61e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00602 - - gmx:100816046 845.884