Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00591 ATGCAAACCTCTCAGAAAGGCCAAAGAGGTCTTCATGTGTACCACCAGCCTATGGAAGATATTCAGCCCTACCATTTATCTCACTACCAAATCTATGATAGCAATTCGAGCCATGATATCCATGATAGCAGCAGCCAGGGAACCAATGTTTCATTTGAAACCTACAAGGAGCAATACTTTACCCTGGAATCATCCCCGGCAACGTCTGCTGTCATAGTTTGTGATTCCCCTTCGGGTGCCAGTGTATCATCTAATAGGAGTCCCTTTTCTCCTCAAGGTTCATGCTTGTCGGATCAGCACCAGTCCTCTGACCACACCTACGGTTCACCAATAAGTGGTTCATCAAGTGCTGATGATGGCAATGACTTGAAGCACAAACTTAGAGAGCTGGAGATTTCATTGTTGGGGCCTGAATCAGATATTGTTGACAGTTGTTATTGCAGCTTCAAAGGGGGCtaccaaacttctccaatggctgGATGGAGTTGGGATCAGCTTGCAGAAATGATTCCTAAGTTAAACTTGAAAGACGTTCTCATTACTTGTGCACAAGCCATGTCTGACGGTGATATTCCAAGAGCAATAGGCTGGATGGATAAAATATTGGTAAAGATGGTATCAGTTTCTGGAGAGCCAATCCAGAGGTTGGGTGCTTACATGTTGGAAGGGCTTAGAGCGAGGTTGGAAAAATCAGGGAGTATAATCTACAAAGCCTTGAAGTGCGAACAGCCAACAAGCAAAGAACTGATGAGTTACATGGGCGTCCTATACCAGATTTGCCCATATTGGAAGTTTGCTTACACATCTGCTAATGTTGTCATTGCAGAAGCAATGGAAAATGAATCCAGAATTCATATCATTGACTTCCAAATTGCTCAGGGCACTCAGTGGATGTTGCTTATGAATGTTCTTGCCCATCGGCCCGGCGGGCCTCCCTCCATTCGGGTCACCGGTGTTGATGATTCTCAATCATTCCATGCTCGTGGTGGAGGACTTCACATTGTAGGACAACGCTTATCAGACCATGCCAATTCACTTGGTATACCATTTGAGTTTCATAGTGCAGCCATGTCTGGTTGTGAGGTTCAACGAGAAAATCTAGGAGTTCAACCAGGGGAAGCCCTTGCTGTGAATTTTCCTTATATTTTGCACCACATGCCGGATGAAAGCGTGAGCACCGAGAATCACAGAGACAGGCTATTGAGATTGGTCAAAAGCTTGTCTCCCAAGGTTGTGACCGTTGTCGAGCAAGAATCCAACACCAACACATCTCCCTTTTTCCACAGGTTTGTTGAGACCATGGATTATTATACTGCCATGTTTGAATCGATAGACGTAGCTCGCCCTAGAGATGACAAACAACGAATTAGTGCAGAGCAGCATTGTGTAGCTCGGGACATTGTCAACATGATAGCGTGCGAGGGAGCTGACAGGGTGGAAAGACATGAACTTTTAGGAAAATGGAGATCAAGATTTTCCATGGCCGGATTTACACCATGCCCATTGAGTCCCTCAGTGGCTGCTGCAGTCAGTGATCTATTATCAAGGGagtattatcaaaattattggaTTCAACCGAAGGATGGCGCTCTATATCTTGGCTGGAGAAGCAGAACTATGAGCACCGTTTCCGCGTGGAGGTG 1643 0.4461 MQTSQKGQRGLHVYHQPMEDIQPYHLSHYQIYDSNSSHDIHDSSSQGTNVSFETYKEQYFTLESSPATSAVIVCDSPSGASVSSNRSPFSPQGSCLSDQHQSSDHTYGSPISGSSSADDGNDLKHKLRELEISLLGPESDIVDSCYCSFKGGYQTSPMAGWSWDQLAEMIPKLNLKDVLITCAQAMSDGDIPRAIGWMDKILVKMVSVSGEPIQRLGAYMLEGLRARLEKSGSIIYKALKCEQPTSKELMSYMGVLYQICPYWKFAYTSANVVIAEAMENESRIHIIDFQIAQGTQWMLLMNVLAHRPGGPPSIRVTGVDDSQSFHARGGGLHIVGQRLSDHANSLGIPFEFHSAAMSGCEVQRENLGVQPGEALAVNFPYILHHMPDESVSTENHRDRLLRLVKSLSPKVVTVVEQESNTNTSPFFHRFVETMDYYTAMFESIDVARPRDDKQRISAEQHCVARDIVNMIACEGADRVERHELLGKWRSRFSMAGFTPCPLSPSVAAAVSDLLSREYYQNYWIQPKDGALYLGWRSRTMSTVSAWR 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00591 547 MobiDBLite consensus disorder prediction 82 118 - -
Bva13g00591 547 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 21 546 - -
Bva13g00591 547 MobiDBLite consensus disorder prediction 82 120 - -
Bva13g00591 547 Pfam GRAS domain family 175 547 IPR005202 -
Bva13g00591 547 ProSiteProfiles GRAS family profile. 166 547 IPR005202 -
Bva13g00591 547 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 21 546 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00591 Bva-Chr13 2683419 2686836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00591 1 547 GRAS Transcription Factor Family AT4G17230 60.830 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva13g00591 GRAS 2.1e-123 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00591 - - gmx:100819190 831.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00591 13 2683419 2686836 Bva13g00591 13 2683419 2686836 ECH