Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00557 ATGAAACTTGATAGCTCCAACGGAGAGATGCGTACGGCTAACGAAGTTTCACCGCCCTTCACCATTGATCTTTCGCTGCAGCGGAATTCTGTGTCGATCGGAGACGATACTGAGAGGGATGGGGAGGAGATATTTGTGCCTCCACTGAATTTTGCTATGGTGGATAATGGCATTTTTCGGTCGGGTTTTCCCGATTCTGCCAACTTCGGATTCCTGAAATCCCTTCGTCTCCGTTCCGTTATTTGTTTGTGCCCTGAACCGTATCCAGAAGCGAATTCAGAATTTTTAAAGGCTAATGGCATAAGGCTTTATCAATTTGGGATCGAGAACTGTAAGGAACCTTTTGTTAACATCCCAGAGGATATAGTTCGTGAAGCAATGAAGGTTCTCCTCGATTCCAAGAACCACCCTCTGCTAATTCACTGCAAGCGAGGAAAGCACCGCACTGGTTGTCTGGTGGGATGCTTGAGAAGGTTGCAGAGATGGTGTTTATCGTCTGTCTTTGACGAGTATCAAAGGTTTGCTGCTGCCAAAGCCAGAGTGTCAGATCAGAGGTTCATAGAACTGTTTGAtatttcaagtttgaagcATTGTCCGATGTCATTTTCATGCTCAAGGAGATA 623 0.4462 MKLDSSNGEMRTANEVSPPFTIDLSLQRNSVSIGDDTERDGEEIFVPPLNFAMVDNGIFRSGFPDSANFGFLKSLRLRSVICLCPEPYPEANSEFLKANGIRLYQFGIENCKEPFVNIPEDIVREAMKVLLDSKNHPLLIHCKRGKHRTGCLVGCLRRLQRWCLSSVFDEYQRFAAAKARVSDQRFIELFDISSLKHCPMSFSCSRR 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00557 207 ProSitePatterns Tyrosine specific protein phosphatases active site. 140 150 IPR016130 GO:0016311|GO:0016791
Bva13g00557 207 ProSiteProfiles Dual specificity protein phosphatase domain profile. 50 204 IPR020422 GO:0006470|GO:0008138
Bva13g00557 207 PANTHER TYROSINE-PROTEIN PHOSPHATASE 1 206 - -
Bva13g00557 207 Gene3D Protein tyrosine phosphatase superfamily 44 194 IPR029021 -
Bva13g00557 207 CDD PFA-DSP_Siw14 45 191 - -
Bva13g00557 207 PANTHER - 1 206 - -
Bva13g00557 207 PRINTS Plant and fungal dual specificity phosphatase signature 118 132 IPR020428 GO:0016791
Bva13g00557 207 PRINTS Plant and fungal dual specificity phosphatase signature 45 62 IPR020428 GO:0016791
Bva13g00557 207 PRINTS Plant and fungal dual specificity phosphatase signature 101 115 IPR020428 GO:0016791
Bva13g00557 207 PRINTS Plant and fungal dual specificity phosphatase signature 82 95 IPR020428 GO:0016791
Bva13g00557 207 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 45 192 IPR029021 -
Bva13g00557 207 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 113 153 IPR000387 GO:0016311|GO:0016791
Bva13g00557 207 Pfam Tyrosine phosphatase family 46 197 IPR004861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00557 Bva-Chr13 2543108 2545775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00557 38 207 Protein tyrosine phosphatase (PTP) family AT4G03960 75.882 1.07e-102 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00557 K18045 - tcc:18597241 325.865