Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00547 ATGTCGTCAACCTCTGATATCTTCAGCTCCATTGCTCAATCCAAGCTACAAGCCATCCatgcaaagaaagaccacGAAGATGGATCCGACTTGCTCTCGAATCGGAGCGAACCCATCAACGCCCGGTCCAACTCGTTCCACGCTCTACCCAACTCGCCAACTTCGAGGAGCCGTCAATCCTCTCCGAGCCATTCGCCGAGGCTTGGTCCAAGTCGATTCTCAAACTCCCGTAGATCTCATCCTCGATCTTCGTCTTTTGGATTGAAAACTTGGAGCTTCTTGTGGAAATGGGAGCAGGAATTCAAGCCGCAGCAGCAGAAGACGAAAATGAAGTTGGCGAAGCCGTGGTATCGAAGGAAACGAGTGAAAGGGCTTTTGGCGCTTATAGGGCTGCTGGGTTGCTTTATCTTGGTGAATTGGATTATGCTTGTGCGGCTACAACATGATGGTGCCCCTGCTAAAGTTGCTGAGATATCATCGGATTCATCTACAGCTTCTCTTTCGGTTTCGGTTCAGGGAAAATGGAAGAAAcctggaaaaggaaaaaggccACAGAAAGGAAATTATGGAAGGTTGTTGGCTTTGGCCGCCCATGCCTTGGCAGAGAATAAACGTGAACCCAAGGATTTGTGGCAAGAGCCCTTGGCTCCAGCTTCCGCTTGGAGACCTTGTGCTGATCAGCGTAATTGGGAGCCTAGTGagaaaaataatggatACATGTTGGTTACTGCAAATGGTGGGATGAATCAGCAGAGAGTAGCTGTTTGCAATGCTGTAGTTGTGGCAAGGTTGCTTAATTCAACTTTGGTTGTTCCCAAGTTTATGTACAGTAGTGTATGGAGAGATGTGAGTCAATTCAGCGATATCTATCAGGAGGAGCATTTTATTAACTACTTGACTCCTGATATTCCGATAGTGAAGGAACTTCCTAAGGAACTGCAGTCGTTAGACCTGGAGGCAATTGGAAGTGTTGTGACAGATGTTGAAATGGGGAAAGAGGCTAAGCCAagtttttacttgaaaaacATTTTACCTATTCTACTTAAAAACCGAGTTGTTCATTTTGTTGGATTTGGGAATCGGTTGGCATTTGATCCAATTCCTTTTGAGCTTCAGAGACTTCGTTGCAGATGTAATTTCCATGCCCTGCAATTTGTTCCCAAAATACAAGAAACTGGTGCCTTGCTTGTCAAAAGGTTGCGCCAGCGTACAGGTCATGCTGGACCATTGGACCATTATCTTGTTGGTCCATTAGCAGAATCAATTACAGAGGGAGGTGGAAATCATTCCAAGAAAGCATCTAAATACCTGGCTTTACATCTCAGATTTGAGATCGACATGGTAGCCCATTCTTTATGTGAATTTGGTGGAGGCGAAGCAGAGAGGAAAGAGTTGGAAGCATATCGTGAAATCCATTTCCCTGCATTAGCACATCTTGAGAAGACTACAAAATTACCATCTCCTTCTGAGCTTAGGTCTGAAGGCCTATGTCCTTTGTCACCTGAAGAAGCAGTTCTTATGCTTGCGGCTCTTGGTTTTAATCGCAAGACACACGTATTTGTGGCTGGCTCTAATTTATATGGAGGCCGTTCACGGTTGGTTGCTTTGACCAGCTTGTATCCTAATTTAGTCACTAAAGAGAACTTGCTTTCTTCTGCAGAAATTGAACCATTTGCAAATTATTCATCTCAGTTAGCAACACTGGACTTCATAGCCTGCACTGCTGCTGATGCATTTGCCATGACCGATTCAGGAAGTCAGTTTTCATCTTTGGTCTCTGGGTATCGAATATATTATGGTGGAGGAAAAATGCCAACAATACGGCCAAATAAACGCAGGCTTGCAAGTATCTTTACAAAGAACAACACTATAGAGTGGCGTGTGTTTGAACAGAGAGTTAGGAAAGCTGTTAGACAAACAAAACATGTACAGACAAGGCCCAAGGCTAGAAGTGTTTACAGATATCCTCGGTGTAAAGAATcTGATTTCTATACAAACTGTGCTCTGAATCCCAGGGGAGAGGAAGCTATGCAAAAATATTTAGCCAGCGTGGCGCTTTTGTTGGTTCACCTACACGTAAATGCAACCATTTTCTTCTG 2099 0.4312 MSSTSDIFSSIAQSKLQAIHAKKDHEDGSDLLSNRSEPINARSNSFHALPNSPTSRSRQSSPSHSPRLGPSRFSNSRRSHPRSSSFGLKTWSFLWKWEQEFKPQQQKTKMKLAKPWYRRKRVKGLLALIGLLGCFILVNWIMLVRLQHDGAPAKVAEISSDSSTASLSVSVQGKWKKPGKGKRPQKGNYGRLLALAAHALAENKREPKDLWQEPLAPASAWRPCADQRNWEPSEKNNGYMLVTANGGMNQQRVAVCNAVVVARLLNSTLVVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIPIVKELPKELQSLDLEAIGSVVTDVEMGKEAKPSFYLKNILPILLKNRVVHFVGFGNRLAFDPIPFELQRLRCRCNFHALQFVPKIQETGALLVKRLRQRTGHAGPLDHYLVGPLAESITEGGGNHSKKASKYLALHLRFEIDMVAHSLCEFGGGEAERKELEAYREIHFPALAHLEKTTKLPSPSELRSEGLCPLSPEEAVLMLAALGFNRKTHVFVAGSNLYGGRSRLVALTSLYPNLVTKENLLSSAEIEPFANYSSQLATLDFIACTAADAFAMTDSGSQFSSLVSGYRIYYGGGKMPTIRPNKRRLASIFTKNNTIEWRVFEQRVRKAVRQTKHVQTRPKARSVYRYPRCKECMCRIE 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00547 666 MobiDBLite consensus disorder prediction 16 85 - -
Bva13g00547 666 Pfam GDP-fucose protein O-fucosyltransferase 239 599 IPR019378 -
Bva13g00547 666 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 45 665 - -
Bva13g00547 666 MobiDBLite consensus disorder prediction 33 85 - -
Bva13g00547 666 PANTHER O-FUCOSYLTRANSFERASE 2 45 665 - -
Bva13g00547 666 MobiDBLite consensus disorder prediction 18 32 - -
Bva13g00547 666 CDD O-FucT_plant 239 603 IPR024709 -
Bva13g00547 666 PIRSF UCP009360 92 666 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00547 Bva-Chr13 2475447 2479562 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00547 210 620 Miscellaneous Gene Families AT1G22460 32.688 3.68e-66 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00547 - - jre:109008555 926.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00547 13 2475447 2479562 Bva13g00547 13 2475447 2479562 ECH
Bva14g00526 14 2527607 2530709 Bva13g00547 13 2475447 2479562 ECH