LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva13g00537	ATGTTCATGACTAAGGGAATGAACATTGAAGAATCGGTTGCAATTTTAGGTGCACACACACTAAGAGTTGGACACTGCTTAAATATTGTTAGAAGACTGGGATTGTTTGGTATTGACTCGAGAATTTCTAAAGATTTCCGAACTGCACCCTTTGTTAAACAGTTCGCCATGGATCAGAATTACTTCTTCCAGGTTTTCTCTTCTGCATTTGTTAAACTTTCTTCTACCAATGTTCTCACCGCACAACAGGGTGAGGTCCGCAGGCAGTGCAACCGTGTCAACTA	284	0.412	MFMTKGMNIEESVAILGAHTLRVGHCLNIVRRLGLFGIDSRISKDFRTAPFVKQFAMDQNYFFQVFSSAFVKLSSTNVLTAQQGEVRRQCNRVN	94

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva13g00537	94	ProSiteProfiles	Plant heme peroxidase family profile.	1	94	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Bva13g00537	94	PANTHER	PEROXIDASE 25-RELATED	1	33	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Bva13g00537	94	PANTHER	PEROXIDASE 25-RELATED	34	92	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Bva13g00537	94	SUPERFAMILY	Heme-dependent peroxidases	2	94	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Bva13g00537	94	Pfam	Peroxidase	2	70	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Bva13g00537	94	Gene3D	-	74	94	-	-
	Bva13g00537	94	PANTHER	PEROXIDASE	1	33	-	-
	Bva13g00537	94	PANTHER	PEROXIDASE	34	92	-	-
	Bva13g00537	94	Gene3D	Peroxidase, domain 2	28	73	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva13g00537	Bva-Chr13	2421673	2422253	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva13g00537	34	94	Peroxidase	AT3G17070	55.738	2.42e-16	69.7

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva13g00537	K00430		-	gmx:100797313	102.449