LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva13g00513	ATGGCTGAGGCTACGCCAGTTGTCCCTAATTCAGAGTTGTTGGAATGGCCAAAGAAAGATAAGCGCCGTTTCCTCCATGCTGTCTACCGTGTTGGTGATCTCGATCGTACTATCAAATTTTACACTGAATGTTTTGGAATGAAGCTTTTGAGGAAAAGAGATGTTCCAGAAGAGAAATACTCCAATGCTTTCCttggatttggtccagaagAATCCCATTTTGTTGTAGAATTAACATACAATTATGGGGTAACCTCATATGATATTGGAACTGGTTTTGGACATTTTGCAATTGCAACTCCAGATgtttatAAACTGGTTGAAAATATCCGGGCCAAGGGTGGAAACATCACCAGGGAGCCTGGTCCAGTTAAGGGTGGGACATCAGTCATTGCTTTTGTGAAGGATCCCGATGGTTATGTGTTTGAACTCATCCAAAGAGCTTCAACTCCTGAGCCATTGTGTCAAGTAATGCTCCGTGTTGGTGATTTGGAGCGCTCAATTAAGTTCTATGAAAAGGCTTTGGGTATGAGGGTTGTGAAGAAGGTTGATAGGCCTGACTACAAGTACACCCTAGCTATGCTTGGGTACGCAGAGGAGCATGAGACAACTGTTTTGGAGTTGACTTATAACTACGGTGTGACTGAATACACCAAGGGAAATGCATATGCACAGGTTGCTATTGGCACTGATGACGTATACAAGAGTGCCGAGGTAGTCAACGTAGTTACACAGGAGCTCGGAGGGAAAATTACTCGGCAAGCAGGGCCAATTCCTGGGATTAACACCAAAATCACCTCCTTCTTAGATCCAGATGGATGGAAAACCGTCTTGGTTGACAATCAAGATTTCCTGAAGGAACTGCAGTG	869	0.4292	MAEATPVVPNSELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEESHFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKLVENIRAKGGNITREPGPVKGGTSVIAFVKDPDGYVFELIQRASTPEPLCQVMLRVGDLERSIKFYEKALGMRVVKKVDRPDYKYTLAMLGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAEVVNVVTQELGGKITRQAGPIPGINTKITSFLDPDGWKTVLVDNQDFLKELQ	289

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva13g00513	289	Pfam	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	156	275	IPR004360	-
	Bva13g00513	289	Pfam	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	25	144	IPR004360	-
	Bva13g00513	289	ProSitePatterns	Glyoxalase I signature 1.	156	177	IPR018146	GO:0004462\|GO:0046872
	Bva13g00513	289	PANTHER	LACTOYLGLUTATHIONE LYASE-LIKE PROTEIN	13	289	-	-
	Bva13g00513	289	TIGRFAM	glyox_I: lactoylglutathione lyase	12	156	IPR004361	GO:0004462\|GO:0046872
	Bva13g00513	289	TIGRFAM	glyox_I: lactoylglutathione lyase	154	284	IPR004361	GO:0004462\|GO:0046872
	Bva13g00513	289	ProSiteProfiles	Vicinal oxygen chelate (VOC) domain profile.	153	281	IPR037523	-
	Bva13g00513	289	ProSiteProfiles	Vicinal oxygen chelate (VOC) domain profile.	23	147	IPR037523	-
	Bva13g00513	289	CDD	GlxI_Ni	25	145	-	-
	Bva13g00513	289	ProSitePatterns	Glyoxalase I signature 2.	90	102	IPR018146	GO:0004462\|GO:0046872
	Bva13g00513	289	Gene3D	-	2	149	IPR029068	-
	Bva13g00513	289	PANTHER	LACTOYLGLUTATHIONE LYASE	13	289	-	-
	Bva13g00513	289	Gene3D	-	150	289	IPR029068	-
	Bva13g00513	289	SUPERFAMILY	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	22	150	IPR029068	-
	Bva13g00513	289	SUPERFAMILY	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	154	280	IPR029068	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva13g00513	Bva-Chr13	2334968	2338350	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva13g00513	156	280	Calmodulin-binding Proteins	AT1G08110	29.333	3.84e-11	60.1

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bva13g00513	13	2334968	2338350	Bva13g00513	13	2334968	2338350	ECH
	Bva14g00606	14	2859666	2863304	Bva13g00513	13	2334968	2338350	ECH