Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00498 ATGAGCGACTCAGATAAAAGTAGCAGCAATCACAGTGGGCATGATTCCCGAGGACGTGATGATGAACTGGAATTCTCTGAGGACGAGGAGGCACTTATTGCTAGGATGTTTAGCTTGGTTGGACcaagGTGGTCTCTGATTGCTGGGAGAATCCCAGGAAGGACAGCACAAGAGATTGAAAAGTACTGGACATGCATACGAAACACAATAACCAATAAAGAAGCTTG 227 0.4493 MSDSDKSSSNHSGHDSRGRDDELEFSEDEEALIARMFSLVGPRWSLIAGRIPGRTAQEIEKYWTCIRNTITNKEA 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00498 75 MobiDBLite consensus disorder prediction 1 24 - -
Bva13g00498 75 CDD SANT 24 63 IPR001005 -
Bva13g00498 75 PANTHER AND CPC, PUTATIVE-RELATED 4 65 - -
Bva13g00498 75 Pfam Myb-like DNA-binding domain 24 63 IPR001005 -
Bva13g00498 75 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 25 71 IPR017930 -
Bva13g00498 75 SMART sant 21 69 IPR001005 -
Bva13g00498 75 Gene3D - 24 75 - -
Bva13g00498 75 MobiDBLite consensus disorder prediction 1 21 - -
Bva13g00498 75 ProSiteProfiles Myb-like domain profile. 17 67 IPR001005 -
Bva13g00498 75 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 4 65 - -
Bva13g00498 75 SUPERFAMILY Homeodomain-like 25 73 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00498 Bva-Chr13 2275305 2275695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00498 25 73 MYB Transcription Factor Family AT4G38620 54.000 9.98e-13 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva13g00498 Myb_DNA-binding 2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00498 - - nnu:104612802 88.9669