Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00496 ATGGGTTGTCGTAGtagcaaagagaaaaaatcaaGGCAAGAATTTAGTGGCTATGGATCAAACACGGGTAGAGTTACAACCCATCAAAGTTATAACACTGTTCGTCCTCCTACTACGCAGAACGAAACATCAGCACCCAAGCCTCGGCCACAGTCACAGCCGCCAATTTTCAGCCAACCGAAACCTTCTTCCCAAAATGCCAGACCTGTCCAGAGGCCAGAGGCTACTATTCTGGGTAAACCCCTTGATGATGTCAAAAAGTACTACACTTTGGGCAAAGAATTGGGTAGGGGCCAGTTTGGGATTACCTATTTGTGTACTGAGAATTCCACTGGTCGAAGTTATGCTTGTAAATCCATATTGAAGAGGAAGCTCGTGTCCAAATCTGACAGAGATGATATGAAGAGGGAGATTCAGATTATGCAGCATATGTCTGGGCAGCCAAACATTGTAGAATTCAAGGGTGCTTACGAGGATAGGTATTCCGTGCACCTTATAATGGAACTCTGCGCTGGTGGGGAGCTTTTTGATCGGATTATTGCTGAGGGTCAATATTCAGAGAGAGCCGCTGCTGCAATTTGCAGAGCAATTGTTAATGTTGTGCacatttgtcattttatggGAGTAATGCATCGTGATCTAAAGCCTGAGAATTTCTTGCTCTCTAGCAAGGATGAAGGAGCAACGCTCAAGGCAACTGATTTTGGACTCTCTGTCTTTATTGAGGAGGGGAAGGTTTACCGTGATATGGTAGGCAGTGCTTATTATGTTGCTCCTGAGGTATTGCGCCGTAGTTATGGGAAGGAAATTGATATTTGGAGTGCGGGCATCATGTTGTATATTCTTCTGAGTGGTGTACCTCCTTTTTGGGCTGAAACTGAAAAGGGAATATTTGACGCCATTCTAGAAGGTAAAATTGACTTTGAAAGTAAACCATGGCCATCAATATCAGATGGTGCAAAAGATCTAGTCAGGAAGCTGTTGACACAGGACCCCAAGAAGAGAATTACTTCTGCTCAAGTTCTGGAACACCCATGGATCAGAGAAGGTGGAGAGGCATCAGATAAGCCAATTGATAGTGCAGTCCTGTCTAGAATGAAGCAATTCAGGGCAATGAATAAGCTCAAGAAGCTTGCATTGAAGGTTATAGCTGAAAACCTATCCGAAGAAGAGATTAAAGGTCTCAAAACAATGTTCACAAACATGGACACCGACAATAGTGGCACCATTACCTATGAAGAGCTGAAGACAGGCTTGGCTCGAATTGGATCACGACTGTCTGAGGCCGAAGTCAAGCAACTTATGGAAGCTGCTGATGTTGATGGAAATGGATCAATTGACTATATTGAATTCATCTCAGCCACAATGCATAGATATCGACTTGAAAAAGATGAGCACCTGTATAAAGCATTTCAGTACTTTGATAAGGATAACAGTGGGCATATTACCAGAGATGAACTGGAGATGGCTATGAGACAGCATGGGATGGGCGATGCAACCaccattaaagaaattatttctgAAGTGGATACGGATAATGATGGAAGAATAGACTATGAGGAATTCTGTGCAATGATGAGAAGTGGAATGCAACATCCAATGATCTA 1607 0.4207 MGCRSSKEKKSRQEFSGYGSNTGRVTTHQSYNTVRPPTTQNETSAPKPRPQSQPPIFSQPKPSSQNARPVQRPEATILGKPLDDVKKYYTLGKELGRGQFGITYLCTENSTGRSYACKSILKRKLVSKSDRDDMKREIQIMQHMSGQPNIVEFKGAYEDRYSVHLIMELCAGGELFDRIIAEGQYSERAAAAICRAIVNVVHICHFMGVMHRDLKPENFLLSSKDEGATLKATDFGLSVFIEEGKVYRDMVGSAYYVAPEVLRRSYGKEIDIWSAGIMLYILLSGVPPFWAETEKGIFDAILEGKIDFESKPWPSISDGAKDLVRKLLTQDPKKRITSAQVLEHPWIREGGEASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSEEEIKGLKTMFTNMDTDNSGTITYEELKTGLARIGSRLSEAEVKQLMEAADVDGNGSIDYIEFISATMHRYRLEKDEHLYKAFQYFDKDNSGHITRDELEMAMRQHGMGDATTIKEIISEVDTDNDGRIDYEEFCAMMRSGMQHPMI 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00496 535 SMART serkin_6 89 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00496 535 Pfam Protein kinase domain 89 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00496 535 ProSitePatterns Protein kinases ATP-binding region signature. 95 122 IPR017441 GO:0005524
Bva13g00496 535 MobiDBLite consensus disorder prediction 1 77 - -
Bva13g00496 535 ProSitePatterns EF-hand calcium-binding domain. 475 487 IPR018247 -
Bva13g00496 535 Pfam EF-hand domain pair 465 527 IPR002048 GO:0005509
Bva13g00496 535 Pfam EF-hand domain pair 395 455 IPR002048 GO:0005509
Bva13g00496 535 ProSiteProfiles Protein kinase domain profile. 89 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00496 535 Gene3D Phosphorylase Kinase; domain 1 91 174 - -
Bva13g00496 535 Gene3D - 373 526 - -
Bva13g00496 535 ProSiteProfiles EF-hand calcium-binding domain profile. 426 461 IPR002048 GO:0005509
Bva13g00496 535 SUPERFAMILY Protein kinase-like (PK-like) 87 355 IPR011009 -
Bva13g00496 535 ProSiteProfiles EF-hand calcium-binding domain profile. 502 532 IPR002048 GO:0005509
Bva13g00496 535 Gene3D Transferase(Phosphotransferase) domain 1 175 355 - -
Bva13g00496 535 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 21-RELATED 43 531 - -
Bva13g00496 535 ProSiteProfiles EF-hand calcium-binding domain profile. 390 425 IPR002048 GO:0005509
Bva13g00496 535 Gene3D - 363 456 - -
Bva13g00496 535 ProSiteProfiles EF-hand calcium-binding domain profile. 462 497 IPR002048 GO:0005509
Bva13g00496 535 ProSitePatterns EF-hand calcium-binding domain. 403 415 IPR018247 -
Bva13g00496 535 CDD STKc_CAMK 89 346 - -
Bva13g00496 535 ProSitePatterns EF-hand calcium-binding domain. 510 522 IPR018247 -
Bva13g00496 535 ProSitePatterns EF-hand calcium-binding domain. 439 451 IPR018247 -
Bva13g00496 535 SUPERFAMILY EF-hand 386 526 IPR011992 -
Bva13g00496 535 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Bva13g00496 535 PANTHER SERINE/THREONINE-PROTEIN KINASE 43 531 - -
Bva13g00496 535 MobiDBLite consensus disorder prediction 15 47 - -
Bva13g00496 535 SMART efh_1 430 458 IPR002048 GO:0005509
Bva13g00496 535 SMART efh_1 394 422 IPR002048 GO:0005509
Bva13g00496 535 SMART efh_1 501 529 IPR002048 GO:0005509
Bva13g00496 535 SMART efh_1 466 494 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00496 Bva-Chr13 2266634 2271043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00496 1 533 EF-hand Containing Proteins AT4G04720 75.422 0.0 832
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bva13g00496 Pkinase 2.5e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00496 K13412 - gmx:100812843 870.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00496 13 2266634 2271043 Bva13g00496 13 2266634 2271043 ECH
Bva14g00590 14 2775404 2780021 Bva13g00496 13 2266634 2271043 ECH