Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00480 ATGAGTAGTTGTTTTTCCTGCTGCAACTCCGAAAATGCGACAACGCCTTCTCACAAGGGCAGTACTCACCgggattttcaaaataaaagtggCCGGAAAACAATCAAATCCGTTATGGCGACTTTCTCCATGAAAACGGGTAGCAGCAGGAGAAAACAGATTCTTGAAGAGATAAGAAAATATGGAAgtgttaaaaatgaaattcaggCATTCACATATCAAGAAATGAATGAAGCAACTGACAACTTCAATCCTGATCGTATCATTGGCGAAGGTGGATTTGGAAAGGTCTACAAAGGACACCTGAAGAACATTAATGAGGATGTAGCTGTGAAGCAACTTGACAGGAATGGAAAGCAAGGGACACGAGAATTCTTTTCAGAGGTTTTGATGTTAAGTCTGGTGAAGCATGAAAACCTAGTCCAGCTGATTGGATATTGTGCAGAAGGCGATCATAGGATTCTAGTCTATGAACTCATGCCCCAAAGTACTGTCGAAAATCATCTTCTAGACTTAGCTCCAGGCAAGGAGCCTCTGGATTGGAAAACAAGGATTAAAATAGCTTTGGGAGCAGCAAGCGGGCTTGAATATCTGCATGACACAGCTCAACCACCAATGATATACCGTGATTTTAaagcatcaaatatattattagatgATGAATTCAATCCTAAGCTTTCTGATTTTGGATTAGCTAAATTGGGCCCAGCAGAAGCCAATGAGCATATCTCTACAAGGGTGATGGGGACTTATGGCTACTGTGCACCTGAGTATGCTTCTACTGGTCAACTCACCAGAAAGTCAGATGTGTATAGTTTTGGTGttgtttttttagaaatgATCACAGGTAGGAGAGTAATTGACAACTCAAGACCAACAGAGGAGCAAAACCTCATTGACTGGGCACAGCCACTGTTTAAGGATAGGACgaagtttaatttaatggcTGATCCTTTGCTTAAAGGTAACTTCCCTGTCAAGGGTCTATTTCAAGCTCTTGCAGTGGCAGCAATGTGTCTCCAAGAAGATGCTGAGACTAGACCTCCAATGGCTGAAGTTGTAACTGCTCTAGAGCATCTATCACGGAAAACAGATGAAGGAAATGACAACACGGTTGAAACCGTGGTTAGTTCTTCACATATTGAATcctttaaaagaaatgcaaaCGAAGACCGAGAAATGTA 1184 0.386 MSSCFSCCNSENATTPSHKGSTHRDFQNKSGRKTIKSVMATFSMKTGSSRRKQILEEIRKYGSVKNEIQAFTYQEMNEATDNFNPDRIIGEGGFGKVYKGHLKNINEDVAVKQLDRNGKQGTREFFSEVLMLSLVKHENLVQLIGYCAEGDHRILVYELMPQSTVENHLLDLAPGKEPLDWKTRIKIALGAASGLEYLHDTAQPPMIYRDFKASNILLDDEFNPKLSDFGLAKLGPAEANEHISTRVMGTYGYCAPEYASTGQLTRKSDVYSFGVVFLEMITGRRVIDNSRPTEEQNLIDWAQPLFKDRTKFNLMADPLLKGNFPVKGLFQALAVAAMCLQEDAETRPPMAEVVTALEHLSRKTDEGNDNTVETVVSSSHIESFKRNANEDREM 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00480 394 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524
Bva13g00480 394 PANTHER RECEPTOR SERINE/THREONINE KINASE 3 388 - -
Bva13g00480 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Bva13g00480 394 SUPERFAMILY Protein kinase-like (PK-like) 66 358 IPR011009 -
Bva13g00480 394 PANTHER OS07G0668900 PROTEIN 3 388 - -
Bva13g00480 394 ProSiteProfiles Protein kinase domain profile. 83 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00480 394 MobiDBLite consensus disorder prediction 362 394 - -
Bva13g00480 394 MobiDBLite consensus disorder prediction 8 30 - -
Bva13g00480 394 Pfam Protein kinase domain 85 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00480 394 CDD STKc_IRAK 89 360 - -
Bva13g00480 394 Gene3D Phosphorylase Kinase; domain 1 42 159 - -
Bva13g00480 394 Gene3D Transferase(Phosphotransferase) domain 1 160 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00480 Bva-Chr13 2191543 2193706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00480 3 365 Glycoside Hydrolase AT3G07070 58.470 2.19e-146 420
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Bva13g00480 Pkinase 3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00480 - - gmx:100305361 511.916