Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00465 ATGGCCAGCCATCAACCTCTGCTAGACAATCCCAGAAGATCAATTTCCAAAACTCTCTGGCTAATTGTCTCTGTAGTAGCTATCATAAGTTCATCAGCTCTCATTGCTTCTTATCTAATCAAACCCACCTCCTTCTTCAACCTCTCCTTCCCCCATTCCCTCCATGTCTGCGAAAACGCCATTGACAGAGCCTCTTGCATAGCCCATGTCTCAGAAGTAGCAAAAGGTTCAATCTTCACCACTAAAGACCACAACTTGATCAAATTGCTGCAATCTCATTTGATGAAAACAACCTCACATATTCAGAGAGCTATGGACACAGCCAACACCGTTAAATACCGAATCAACAATCCGAAGGAGCAAGCTGCTCTACTTGATTGTGAGCAGCTCATGGACTTGTCCATGGACAGAGTTTGGGATTCAATGGTTGCTCTCACAAATAAGAGCATCATTTCCCAGCAAGACGCACACGCTTGGCTAAGCGGTGTGCTCACTAACTACGACACTTGCTTTCATGGTTTAGAGGGTTCAGCTCGTGCACTCATGGAGGCAGAGCTCGGGGACTTGATCTCCGGAGCAAGAACCTCTCTGGCCTTGCTTGTTTCCATTTTGCCTCCAAAGACTGAAATAATAGAACCCCTAAATGGGGATTTCCCGTCTTGGGTGACAAGCAAGGATCGAAAGCTTTTAGAGTTATCGGCTAAGCAAATCAATGCGAATGTGGTGGTTGCTAAGGACGGGAGTGGCAGATTCAAAACTGTGGCAGAAGCTGTGGCATCGGCACCAGACAAAAGTAACGCAAGGTATGTTATTTATGTGAAGGAGGGgatttacaaagaaaatgttgagattgggaagaaaaagaagaacgTGATGCTTGTTGGTGATGGTATGGACGCCACAATCATCACCGGAAGCTTGAATTATGTAGATGGAACAACAACCTTCAAATCTGCCACCGTTGCTGCTGTTGGTGATGGGTTTATAGCCCAAGACCTGCGCTTCCAAAACACAGCAGGGCCGCAGAAGCACCAAGCGGTGGCACTCCGTGTCGGCGCCGATCAATCAGTGATAAACCGATGCAAAATCGATGCTTTCCAAGACACCCTCTACACCCACTCCAACAGGCAGTTCTACCGTGACTCCTTCATCACCGGCACCGTGGATTTCATCTTCGGAAATGCAGCGGTTGTCTTCCAAAAGTGCAAGCTGGTGGCCCGAAAGCCCATGAGCAACCAGAATAATATGATCACGGCCCAAGGTCGTATAGACCCAAACCAAAACACAGGGACTTCAATTCAGCAGTGTGACGTTATACCCAGTACTGATCTGAAGCCTGTGGTGGGCTCAGTGCGGACCTACTTGGGCCGGCCATGGAAGGAGTACTCTAGAACCGTTTATTTGCAGTCAGTTTTGAGTAACCACATTGACCCTGCTGGATGGTCCGAGTGGTCTGGGGATTTTGCTTTGAAGACTCTGTATTATGGAGAGTACATGAACAAGGGACCAGGTGCTGGTACCAGCAAGAGGGTTAAATGGCCTGGTTACCATGTGATTAAGAGTGAAGCAGAGGCTAGAAAGTTCACTGTGGCCGAGCTCATTCAAGGTGGTGTTTGGTTGAAGAATACCGGAGTGGCCTTCACTGAGGGACTCTA 1655 0.4695 MASHQPLLDNPRRSISKTLWLIVSVVAIISSSALIASYLIKPTSFFNLSFPHSLHVCENAIDRASCIAHVSEVAKGSIFTTKDHNLIKLLQSHLMKTTSHIQRAMDTANTVKYRINNPKEQAALLDCEQLMDLSMDRVWDSMVALTNKSIISQQDAHAWLSGVLTNYDTCFHGLEGSARALMEAELGDLISGARTSLALLVSILPPKTEIIEPLNGDFPSWVTSKDRKLLELSAKQINANVVVAKDGSGRFKTVAEAVASAPDKSNARYVIYVKEGIYKENVEIGKKKKNVMLVGDGMDATIITGSLNYVDGTTTFKSATVAAVGDGFIAQDLRFQNTAGPQKHQAVALRVGADQSVINRCKIDAFQDTLYTHSNRQFYRDSFITGTVDFIFGNAAVVFQKCKLVARKPMSNQNNMITAQGRIDPNQNTGTSIQQCDVIPSTDLKPVVGSVRTYLGRPWKEYSRTVYLQSVLSNHIDPAGWSEWSGDFALKTLYYGEYMNKGPGAGTSKRVKWPGYHVIKSEAEARKFTVAELIQGGVWLKNTGVAFTEGL 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00465 551 CDD PMEI-like_4 61 203 - -
Bva13g00465 551 SUPERFAMILY Pectin lyase-like 237 550 IPR011050 -
Bva13g00465 551 Gene3D Invertase/pectin methylesterase inhibitor family protein 55 203 IPR035513 -
Bva13g00465 551 Pfam Plant invertase/pectin methylesterase inhibitor 56 183 IPR006501 GO:0004857
Bva13g00465 551 ProSitePatterns Pectinesterase signature 1. 265 284 IPR018040 -
Bva13g00465 551 PANTHER PECTINESTERASE 23 549 - -
Bva13g00465 551 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 56 182 IPR035513 -
Bva13g00465 551 ProSitePatterns Pectinesterase signature 2. 384 393 IPR033131 -
Bva13g00465 551 Pfam Pectinesterase 240 536 IPR000070 GO:0030599|GO:0042545
Bva13g00465 551 PANTHER PECTINESTERASE 23 549 - -
Bva13g00465 551 TIGRFAM PME_inhib: pectinesterase inhibitor domain 57 178 IPR006501 GO:0004857
Bva13g00465 551 Gene3D - 234 551 IPR012334 -
Bva13g00465 551 SMART PMEI_2 46 199 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00465 Bva-Chr13 2124784 2126927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00465 3 551 Carbohydrate Esterase AT1G11580 56.553 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00465 K01051 - gmx:100815836 809.29