Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00459 ATGGCTGACTCAGAACATTCCTCCACTAATGAAGCCTTGGAGAACCCTCAAGAAGTGACAAAGGAAGAACCAGAGCTAGAATTCTCTGATGATGAGGAAGCACTTACTATCAGAATGTATAATCTAGTGGGAGAAAGGTGGACTCTAATAGCTGGGAGGATTCCTGGAAGAACAGCTGAAGAGATTGAAAAGTATTGGAACTCTAGATACTCAACAAGTCAATG 224 0.4196 MADSEHSSTNEALENPQEVTKEEPELEFSDDEEALTIRMYNLVGERWTLIAGRIPGRTAEEIEKYWNSRYSTSQ 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00459 74 Pfam Myb-like DNA-binding domain 27 68 IPR001005 -
Bva13g00459 74 ProSiteProfiles Myb-like domain profile. 28 70 IPR001005 -
Bva13g00459 74 SMART sant 24 72 IPR001005 -
Bva13g00459 74 MobiDBLite consensus disorder prediction 1 15 - -
Bva13g00459 74 PANTHER MYB-LIKE TRANSCRIPTION FACTOR ETC1 1 74 - -
Bva13g00459 74 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 28 74 IPR017930 -
Bva13g00459 74 SUPERFAMILY Homeodomain-like 28 70 IPR009057 -
Bva13g00459 74 MobiDBLite consensus disorder prediction 1 32 - -
Bva13g00459 74 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 74 - -
Bva13g00459 74 CDD SANT 27 67 IPR001005 -
Bva13g00459 74 Gene3D - 27 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00459 Bva-Chr13 2110583 2111284 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00459 29 68 MYB Transcription Factor Family AT5G35550 65.000 5.95e-14 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva13g00459 Myb_DNA-binding 3.4e-07 CL0123