Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00458 ATGGCTGACTCAGAACATTCCTCAGCTCATGAAGCCTCGGAGAACCCTCAAGAAGTGACAAAGGAAGAACAGAAGCTAGAAATCTCTGATGATGAGGAAGCACTTATTATCAGAATGTTTAATCTAGTGGGAGAAAGGTGGGATCTAATAGCTGGGAGGATCCATGGAAGAACAGCTGAAGATATTGAAAAGTATTGGAACTGGAGCTCGATAAGTAAATG 221 0.4208 MADSEHSSAHEASENPQEVTKEEQKLEISDDEEALIIRMFNLVGERWDLIAGRIHGRTAEDIEKYWNWSSISK 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00458 73 SUPERFAMILY Homeodomain-like 28 68 IPR009057 -
Bva13g00458 73 Pfam Myb-like DNA-binding domain 29 67 IPR001005 -
Bva13g00458 73 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 67 - -
Bva13g00458 73 PANTHER MYB-LIKE TRANSCRIPTION FACTOR ETC1 1 67 - -
Bva13g00458 73 MobiDBLite consensus disorder prediction 1 27 - -
Bva13g00458 73 Gene3D - 27 73 - -
Bva13g00458 73 SMART sant 24 72 IPR001005 -
Bva13g00458 73 CDD SANT 29 67 IPR001005 -
Bva13g00458 73 ProSiteProfiles Myb-like domain profile. 20 67 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00458 Bva-Chr13 2108084 2108727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00458 28 67 MYB Transcription Factor Family AT5G35550 62.500 4.12e-12 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva13g00458 Myb_DNA-binding 1.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00458 - - pop:18097403 94.7449